Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1577 ATGGCGGAGATAGCGGTGTTCGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAAACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAAAATCTGTTGAAATTGGTTTGTGAAAACGAAGAAGAGATGGTTCAAACCGTTCATTCCGATCTTTATAAACCCGAATTTGAAGCCTTCGCTCATGAGATAGCTCTATTAAAAGGTTCGTGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGGAGCAATTGTTCCAGAACCTTTCGGTGTCGTCCTTATCATTTCTGCTTGGAATTATCCATTCTTGTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAAGAACATCATCTTTGATGGCAAAACTTTTGGCGAAATATTTGGATACATCTGCTGTAAAAGTTGTTGAGGGTGCTGTTCCCGAAACTAATGCTTTGTTGGAGCAGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGGATAGTGATGGCAGCTGCTGCCAAGCATCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATAGCTGGCAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGACTATATCATAACACCGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTTAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAAACACTTTGATCGCTTGACAAGGCTCTTAGATGATGATAAAGTTTCTGGCAAGATCGTGCATGGAGGTGAAAAGGACAAAACAAAGCTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCACTAATTATGACGGAGGAGATATTTGGTCCCCTACTTCCCATTCTCACGGTCGACAAGGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACTAACAACAAGAAGCTCAAGGAACGATTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGAAACCGCCTTACATCTGACGATTAGCACGTTACCGTTCGGAGGAGTTGGAGAGAGTGGAATGGGAGCTTACCATGGAAAGTTCTCCTTTGATGCATTTAGCCACAAGAAGGCCGTTCTTTATCGAAGTTTCGCAGGCGATGCGCCGATGAGATATCCGCCATACACAAAGGGAAAGCTCAGAATTCTCAAGGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCTTTACTTGGCGCGTGGAGCACACGCGCTTTGTTTGTGGCATGGCAAATCGAGAAATGGAGAATGACAGATGAGGTGACACCGATGACCGATTTAAGAAAATATGAAGCAAATGAAAATACGAGACCTCCATCTTTACGATTCGCCAGCTCCCTGAAATCTCTCCGATTACTCCCTCTCCCAAGGAACACTCCAATCCGTTACTACAACTTCTCCCTCTTTCTCTGTATATACTGA 1671 44.46 MAEIAVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLVCENEEEMVQTVHSDLYKPEFEAFAHEIALLKGSCKLALKELRRWMAPEKVKTSITTFPSSGAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLAKYLDTSAVKVVEGAVPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIAGKWGCNNGQACIAPDYIITPKEFAPKLVESLKQELERFYGKNPLETKDLSRIVNAKHFDRLTRLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILGLIRALLGAWSTRALFVAWQIEKWRMTDEVTPMTDLRKYEANENTRPPSLRFASSLKSLRLLPLPRNTPIRYYNFSLFLCIY 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28077477 28087887 + CmPI595203_11g015770.1 Cmu11g1577 430099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1577 556 PIRSF ALDH 2 475 IPR012394 GO:0006081(InterPro)
Cmu11g1577 556 FunFam Aldehyde dehydrogenase 221 421 - -
Cmu11g1577 556 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491(InterPro)
Cmu11g1577 556 SUPERFAMILY ALDH-like 13 456 IPR016161 GO:0016491(InterPro)
Cmu11g1577 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620(InterPro)
Cmu11g1577 556 CDD ALDH_F3FHI 12 443 - -
Cmu11g1577 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491(InterPro)
Cmu11g1577 556 FunFam Aldehyde dehydrogenase 20 224 - -
Cmu11g1577 556 Pfam Aldehyde dehydrogenase family 2 441 IPR015590 GO:0016491(InterPro)
Cmu11g1577 556 PANTHER ALDEHYDE DEHYDROGENASE 11 481 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0895 Cmu-Chr7:22732549 Cmu11g1577 Cmu-Chr11:28077477 1.20E-135 dispersed
Cmu11g1577 Cmu-Chr11:28077477 Cmu11g1578 Cmu-Chr11:28087913 2.70E-232 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1577 K00128 - csv:101219329 865.914