Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1667 ATGGACCGTGTACAGCTGCAAGATATGAAGAGGCAAACCTTGTCTCCTAATTCTGATGTTGCTACACTTCTAACAACTGATGTGCTCTCCCCATGGCAGCTTTTAAGGTTATTATTCCAATCTCTTTCTTGCGCTGTTCAACTTGGCTTAAACTTGTCTGTGGTCTGGATTGCCATAATTAAAGGCATGGCTAGCTTAAGATACTGCCTCCTTCAAATCTTTGTTGCTTTAGCTATTTCATTTCTGGTTTCTGCACAGGATCAATCAGGATTCATTAGCATCGACTGTGGAAGTTCAGAGAATTCAAGCTACAAAGATAGTGTAACAGACATAAAGTACATTTCCGATGTAAACTTCACACAAACTGGAATAAGTAAGAGCATATCATTAGATTTCAACACCACCACTCTTCCACAGCAGTTCTGGTATGTTAGAAGCTTTCCTGAAGGAGAGAGAAACTGTTACACCATAAAGCTTGCTCAGGGTAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGATGGCCAAGGTACAGCGCCGGCTTTCGATCTGTACATGGGTGTTAATAAATGGGATTCAGTAATACTGCACAATGAATCCAGCATCATAATCAAAGAAGTTATACATGTACTTCCTACATCTTCCATATACATTTGTCTGGTCAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCAAGTTATGTCACTGATTTTGATTTGCTAGCTCTCCACAGACGGTTGGATGTTGGTTCAACGACCAACAGAACCATCAGGTACAATGATGATTTTTCTGATAGGATCTGGATGCCCTATAACTTTCTTAACTATAAAATTATAAGTACTTCATCCACAGTTGATTCAGGAGGTAGCAATTCTTATAATCTACCAAGAATTGTCATGAGCACTGCCATCACAACCTATAATGCCAGTGATCCTCTAGAATTTCACTGGGTTCCTGAAGATCCCAGTACAAAATATCATATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAAGCTAACCAATTAAGGGAATTTAACATCTATCAAAATGGGAATTATCTTCATGGACCATTCTCTCCTGATTACTTGCAGTCAACTACATTGTCTAGCATATCCCCAATGAGTGGAGATGACATTGCATTTTCATTATCAAAAACTAATGCATCAAATCTTCCACCCATCCTCAATGCACTTGAAATCTACATCGTGCTTGACACATCGCAATCACGCACCGATGAACAGGACATTACAGCCCTGATGAACATCAAATCCTTTTATGGATTGAGAAAGAATTGGCAGGGTGATCCATGCCAGCCAAAATCCTTCTTGTGGCTTGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAATAGAATCACCTCCTTGAACTTGTCTTCGAGCGGATTGGTGGGGGAAATAGCTACCTATGTGTCTGAGCTCACATCGTTACAATATTTGGATTTGTCAAACAATAGCTTGAGTGGACCGGTGCCTGGTTTTCTATCCAAATTGCAGTCCTTGAAAGTTTTAGACTTGAGGGACAATCCTCTCCTTGGTTCTATACCAAGTGAACTCATGGATAGATCGAAGAACGGATCCCTTTCAATAAGGGTTGGAGGAAACATGGATTTTTGTGCTTCATCTTCTTGTCAAAAGAAGAAAAAGAGTTACGTTATTACAATTGTAGCAATAGTTTCATCATTGTTTGTCCTCTTAGCTGCAGCAGCAGTATGGATAATATTATGGAGAAAACGAGCCCGAAAACAGCCTGTCATAAGACTCGGATCACTAGAGGAGAAAAAACAGCAGCTATCTTACTCTCAAATAAAGCGTATTACAAACAACTTTGCAAGAAAAATTGGAGAAGGAGGTTTTGCAAAAGTATTCCTCGGTTACTTGGATAATACTCAAGTCGCCGTGAAGGTCCTTAAGTCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGTTGAGAATTCATCATCGAAACTTGACGAGCCTTATCGGATACTGCTGTGAAAAAACCAACCTGGTTCTAATTTATGAGTACATAAATAATGGCAACTTAAAAGAGCATCTATCAGGTGATAAAGTTGGTGTCCTCAGTTGGGAGGAAAGGATGCAAGTAGCAGTCAATGCAGCGCAAGGGTTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGACAGATTCCAAGCTAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGCCATACTCATTTGACAACTGTTGTTGCAGGGACCGATGGTTATCTTGACCCTGAGTATTACGCAACTGGCTGGTTGACTGAGAAAAGCGATGTATATAGTTTTGGAGTTCTTATATTGGAAGTAGTCACTTCCCGTCCAGTCCTCATGATTGATAGAGCTTCTTCACAGAAATATCATATAAGCCAATGGGTAATGCACTTGATGAAAACAGGTGATATAAGGAGCATCGTTGATCAGAGGGTGAGGGAAAACTTCGACTTGAATTCTGCTTGGAAGGCAGTGGAGATTGCTATGAAATGTTTGTCATTGAATTCCATTGATAGGCCAAACATGAAAGAGGTAGTTGCGGTGTTGAGTGAGTGTTTGGCGTTAGAGAAAGCTCGAAAACGAAGAAACGTTGATTCTAATATGGGAAAATCAAATGCAGTTAGTAGGAATTTCAGAGAGAGCGAAGTAACACCTTTTGCTAGATAG 2814 39.87 MDRVQLQDMKRQTLSPNSDVATLLTTDVLSPWQLLRLLFQSLSCAVQLGLNLSVVWIAIIKGMASLRYCLLQIFVALAISFLVSAQDQSGFISIDCGSSENSSYKDSVTDIKYISDVNFTQTGISKSISLDFNTTTLPQQFWYVRSFPEGERNCYTIKLAQGKGYKYLIRASFMYGNYDGQGTAPAFDLYMGVNKWDSVILHNESSIIIKEVIHVLPTSSIYICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLDVGSTTNRTIRYNDDFSDRIWMPYNFLNYKIISTSSTVDSGGSNSYNLPRIVMSTAITTYNASDPLEFHWVPEDPSTKYHIFLHFADLEKLQANQLREFNIYQNGNYLHGPFSPDYLQSTTLSSISPMSGDDIAFSLSKTNASNLPPILNALEIYIVLDTSQSRTDEQDITALMNIKSFYGLRKNWQGDPCQPKSFLWLGLNCSYDDQSPNRITSLNLSSSGLVGEIATYVSELTSLQYLDLSNNSLSGPVPGFLSKLQSLKVLDLRDNPLLGSIPSELMDRSKNGSLSIRVGGNMDFCASSSCQKKKKSYVITIVAIVSSLFVLLAAAAVWIILWRKRARKQPVIRLGSLEEKKQQLSYSQIKRITNNFARKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHRNLTSLIGYCCEKTNLVLIYEYINNGNLKEHLSGDKVGVLSWEERMQVAVNAAQGLEYLHHGCKPPIVHRDVKSANILLNDRFQAKIADFGLSKSFPTESHTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEVVTSRPVLMIDRASSQKYHISQWVMHLMKTGDIRSIVDQRVRENFDLNSAWKAVEIAMKCLSLNSIDRPNMKEVVAVLSECLALEKARKRRNVDSNMGKSNAVSRNFRESEVTPFAR 937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28929823 28937742 + CmPI595203_11g016670.1 Cmu11g1667 430189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1667 937 Gene3D Ribonuclease Inhibitor 429 552 IPR032675 -
Cmu11g1667 937 Gene3D Transferase(Phosphotransferase) domain 1 703 926 - -
Cmu11g1667 937 ProSiteProfiles Protein kinase domain profile. 629 902 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1667 937 SMART serkin_6 629 902 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1667 937 CDD STKc_IRAK 635 900 - -
Cmu11g1667 937 PANTHER OS07G0107800 PROTEIN-RELATED 83 907 - -
Cmu11g1667 937 FunFam Leucine-rich repeat receptor-like kinase 429 562 - -
Cmu11g1667 937 Gene3D Phosphorylase Kinase; domain 1 610 702 - -
Cmu11g1667 937 SUPERFAMILY L domain-like 433 541 - -
Cmu11g1667 937 SUPERFAMILY Protein kinase-like (PK-like) 614 898 IPR011009 -
Cmu11g1667 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1667 937 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 703 911 - -
Cmu11g1667 937 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515(InterPro)
Cmu11g1667 937 Pfam Protein kinase domain 632 895 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1667 937 Pfam Malectin-like domain 94 417 IPR024788 -
Cmu11g1667 937 ProSitePatterns Protein kinases ATP-binding region signature. 635 656 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0033 Cmu-Chr9:635213 Cmu11g1667 Cmu-Chr11:28929823 4.70E-185 dispersed
Cmu09g0034 Cmu-Chr9:640684 Cmu11g1667 Cmu-Chr11:28929823 7.50E-197 dispersed
Cmu10g2779 Cmu-Chr10:34395656 Cmu11g1667 Cmu-Chr11:28929823 9.80E-105 dispersed
Cmu11g1667 Cmu-Chr11:28929823 Cmu05g2586 Cmu-Chr5:34571610 8.10E-64 dispersed
Cmu11g1667 Cmu-Chr11:28929823 Cmu09g0027 Cmu-Chr9:562980 1.30E-178 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75953 PF12819 Malectin_like 2.30E-110 CL0202 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1667 - - - 0.0