Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1679 ATGGCAATGGCGGATTTCAAGCTTCATCGTCTTCTTCTTTCCTTCCTCATTTTATTTCTTTTACTCATTCCTTCCGTAATCGCAGCAGAGGATTGTCAATGTCCTGAAGACACAGAGGAAGACACAGGGGAACGAAATGCAACTTTAGCTATGAAATACAAAGTCATCGCCATAGCTACGATTCTCGTTGCGGGAATCATTGGTGTGGTGATTCCTTTGCTTGGGAAGGTGATTCCGGCGTTAAGTCCGGAGAAGGATATTTTCTTTGTGATTAAAGCTTTTGCTGCTGGAGTTATATTAGCTACTGGATTTATTCACGTTCTTCCTGATGCTTATGAAAATCTTACGTCGTCGAAATTGAAAGAGGATCCATGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTGGCGGCGATGGCTACTTTGATGGTGGATGCGGGTGCGAGCTCTTATTATACTCGGATTCATCTTAATAAAGCGCAGCCTGAGTTGATTGGAGATGATGAAATGCGGGGAGGCGGTGGTCATGATGGTCACGTTCATGTTCATACTCATGCCACTCATGGACATGCTCATGGCTCCGCCGATGTCGTCGGTTCATCCACCGAGATTCTCCGCCACCGTGTCATTTCTCAGGTATTGGAGCTGGGGATAGTGGTACATTCGGTAATTATAGGAATTGGTTTGGGTGTTTCTGAAACTCCGAAAACAATAAGACCTCTTGTGGCCGCCATCACTTTTCATCAGTTATTTGAAGGCATGGGCCTCGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAACGATAATAATGGGGCTTTTCTTTTGCTTGACCACACCAATTGGGATAGCAATAGGCATTGGAGTAACGAAGACTTATGATGAAGATAGCCCAAAAGCACTTATAGTGGAAGGAATTTTGAATGCGGCTTCTTCGGGTATTTTAATCTATATGGCTCTTGTAGATCTTCTTGCTGCTGATTTTATGAACCCCAGAATGCAAAGCAATGGAAAACTTCAACTTTTTGCTAACCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCCTTGCTTGCTATATGGGCATAG 1095 44.29 MAMADFKLHRLLLSFLILFLLLIPSVIAAEDCQCPEDTEEDTGERNATLAMKYKVIAIATILVAGIIGVVIPLLGKVIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAYENLTSSKLKEDPWGKFPFTGLVAMVAAMATLMVDAGASSYYTRIHLNKAQPELIGDDEMRGGGGHDGHVHVHTHATHGHAHGSADVVGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATIIMGLFFCLTTPIGIAIGIGVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLFANLSLILGAALMSLLAIWA 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29064006 29066185 + CmPI595203_11g016790.1 Cmu11g1679 430201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1679 364 PANTHER ZINC/IRON TRANSPORTER 48 363 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cmu11g1679 364 NCBIfam ZIP zinc/iron transport family 38 364 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cmu11g1679 364 Pfam ZIP Zinc transporter 52 361 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2260 Cmu-Chr1:34932495 Cmu11g1679 Cmu-Chr11:29064006 3.30E-79 dispersed
Cmu02g1940 Cmu-Chr2:33271307 Cmu11g1679 Cmu-Chr11:29064006 2.90E-61 dispersed
Cmu08g1639 Cmu-Chr8:28078622 Cmu11g1679 Cmu-Chr11:29064006 7.20E-73 dispersed
Cmu09g2175 Cmu-Chr9:37834629 Cmu11g1679 Cmu-Chr11:29064006 2.10E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1679 K14709 - csv:101215851 574.318