Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu11g1703 | ATGTGGTCTGTGGCAGCTACGATTTCAATTTGGATAATACTTGTGGTATTATTATTATTGGGATGCAAATTTGTAAACTGGATTTGGTTGAAGCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAATTTCTCCAATGATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAAAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAGGTTGCTTGCAGATGGGATTTTAAATCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTACAAAAGCTTAAGGATATGGTACCAGCATTCTATCATAGTTGTAACGAGATGATTAGCAAATGGGAAAACATGGTCTTTGTAGAAGAATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGGAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTCCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGTCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGCTTAAGTCAACTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACACGACTTGGAAAATTGACTTTACCAGCCGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAGCTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACATGCTCCCACCGTCACCATAACAACGCAACCTCAACATAGAGAGCTCATATCATCCTACATAAACTGTAGTTAG | 1560 | 38.08 | MWSVAATISIWIILVVLLLLGCKFVNWIWLKPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNDIAPRVIPSIHHTIQNYGKNSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFARLLADGILNHEGPKWVKHRKIINPAFHLQKLKDMVPAFYHSCNEMISKWENMVFVEESCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSSYSEWQEQARAEVFEIFGNKKPDYDGLSQLKVVTMILNEVLRLYPPVSMFGRFVKKETRLGKLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGVSKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHRELISSYINCS | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 29230632 | 29234343 | + | CmPI595203_11g017030.1 | Cmu11g1703 | 430225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu11g1703 | 519 | FunFam | Cytochrome P450 734A1 | 29 | 513 | - | - | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | CDD | CYP72 | 82 | 508 | - | - | |
| Cmu11g1703 | 519 | Pfam | Cytochrome P450 | 88 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | Gene3D | Cytochrome P450 | 74 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | SUPERFAMILY | Cytochrome P450 | 80 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1703 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu11g1703 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 509 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu10g1608 | Cmu-Chr10:14000940 | Cmu11g1703 | Cmu-Chr11:29230632 | 8.70E-30 | dispersed | |
| Cmu11g1703 | Cmu-Chr11:29230632 | Cmu11g1705 | Cmu-Chr11:29246221 | 1.60E-271 | dispersed | |
| Cmu11g1702 | Cmu-Chr11:29215655 | Cmu11g1703 | Cmu-Chr11:29230632 | 3.70E-107 | tandem | |
| Cmu11g1703 | Cmu-Chr11:29230632 | Cmu11g1704 | Cmu-Chr11:29238073 | 3.20E-264 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu11g1703 | - | - | - | 0.0 |