Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1704 ATGTCGTCTGTAGGAGCTACCATTTCAATTTGGTTAATACTTGTGGTATTATTATTATTATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGCTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTTATGTGGCTTGGATCCATACCCAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTTCACTTATCAACGATTTCCAAAAGCCAACTATGAATCCCTTTGTCAAGTTTCTTGCAGATGGACTTGTAAGTCATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTGGAAAAGCTTAAGGATATGATACCAGCATTCTATCAAAGTTGTAATGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGTAGAAGGATCTTGTGAGTTAGATGTAATGCCTTTTCTAAAAAATATGGCCGCTGATGTGATTTCTCGAACTGCATTTGGGAGTAGCTATGAGAAAGGAAAAGAGATCTTCAAGCTTCAAACTGAACTAGGTGGTTTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCTACAAAGTCAAACAATAAAATGAAAGAAATAAGTAAAGAGATATCAACTTTGGTCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGCGAAGCTATACAAAATGATCTACTAAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAGGCTTTTCTATATTGTTGGGCAAGAAACTACAGCAACATTACTAACTTGGACTATGGTATTATTGAGTTCATACTTAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGTTTAAGTCGTCTAAAAATTGTAACTATGATCTTAAACGAGGTTCTCAGGTTATACCCACCAGTGAGTATGTTTGACCGTCTCATTAAAAAAGAAACAAAACTTGGAAATTTGACTTTACCAGCAGGAGTGATATTGGGCTTACCAATTGTTCTTATCCAACATGATCCTGAGTTATGGGGAGATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTATACCATTTGGTTGGGGTCCTCGAATGTGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAACGATCCTACAACGCTTCTCATTTGAGCTTTCCTCATTCTATACACACGCTCCCGCTATCTCCTTAACCATGCAGCCTCAACATGGAGCTCATCTCAAACTACGCAGACTGTAG 1560 38.27 MSSVGATISIWLILVVLLLLLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAMSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGSIPRVHIMDPEQLKTVFSLINDFQKPTMNPFVKFLADGLVSHEGPKWVKHRKIINPAFHLEKLKDMIPAFYQSCNEMVSKWESMVSVEGSCELDVMPFLKNMAADVISRTAFGSSYEKGKEIFKLQTELGGLVIQSTLGVYIPGWRFLPTKSNNKMKEISKEISTLVLGIMNEREKSMKAGEAIQNDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECRLFYIVGQETTATLLTWTMVLLSSYLEWQEQARAEVFEIFGNKKPDYDGLSRLKIVTMILNEVLRLYPPVSMFDRLIKKETKLGNLTLPAGVILGLPIVLIQHDPELWGDDADEFKPERFSEGVSKATKNPSAFIPFGWGPRMCIGLNFAMIEAKMALSTILQRFSFELSSFYTHAPAISLTMQPQHGAHLKLRRL 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 29238073 29242352 + CmPI595203_11g017040.1 Cmu11g1704 430226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1704 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 SUPERFAMILY Cytochrome P450 81 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 FunFam Cytochrome P450 734A1 31 519 - -
Cmu11g1704 519 Pfam Cytochrome P450 90 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 512 IPR050665 GO:0004497(PANTHER)
Cmu11g1704 519 CDD CYP72 84 514 - -
Cmu11g1704 519 Gene3D Cytochrome P450 74 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1704 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu11g0268 Cmu-Chr11:3230001 Cmu11g1704 Cmu-Chr11:29238073 3.70E-103 dispersed
Cmu11g0553 Cmu-Chr11:6084655 Cmu11g1704 Cmu-Chr11:29238073 6.80E-89 dispersed
Cmu11g1704 Cmu-Chr11:29238073 Cmu06g0792 Cmu-Chr6:9750884 2.20E-63 dispersed
Cmu11g1703 Cmu-Chr11:29230632 Cmu11g1704 Cmu-Chr11:29238073 3.20E-264 tandem
Cmu11g1704 Cmu-Chr11:29238073 Cmu11g1705 Cmu-Chr11:29246221 2.40E-275 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1704 - - - 0.0