Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1729 ATGGTCGGAACTTGGGACATGGATTTGGCTGTTCTTGTTTATGGCTTCCTGCTTTTGAACTGCTTCTTGGAATTTGGATCCCATGCCCAACCTCTGCCTGATCAAGAAGTGAGAGCCCTTCAAGCAATATCTGCAGAGCTAAGGAACTTAAACTGGAATGTTCACCAAAATTCTTGCATTAATGGTGATGGATTTTTCAATAGACCAATCCTTGGTACAGATATTATCAGAGAGGTTAATTGCACTTGCACCACTGTTTGCAGTGTCACTACCATCCGGCTAAAGGGTTTGAATCTAACTGGAACTCTGCCAGCAGCATTTGGAAATCTAACAAAGCTGCAAACAATAGATCTTACTCGCAATTTAATTTCTGGATCGATCCCTAGAGAGTTCGCACAGATTCCTCTTGTTGATTTGTCCATGTTGGGAAATCGTCTCAGTGGTGAAATTCCTCCAGAAATTGGTGACATTGCTACACTTGAGCATTTGGTGTTGGAAGACAATCTCCTTGGAGGGAATCTTCCCGAAAGCCTCGGGCGACTGAGCCGCTTGCGAAGATTACTTCTTTCTGCAAATAATTTCAATGGAACAATTCCAGCATCGTATGGAAACTTGAAGAACTTGACTGATTTTCGGATAGATGGAAATGATGTATCAGGAAGACTTCCTGAATTTATTGGCAATTGGACCAAACTAGAGAGACTGGATATTCAAGGAACTTCTATGGAGACACCAATTCCTAGTGGCATATCTGACTTGAAAAACTTAACCCAATTGAGGATAACTGATTTGAAGGGACTGCCAACAAGTTTTCCTAATTTGACTCAATTGACATCTTTAGAAGAACTGATCCTAAGAAATTGCTTAATCCAGGATCAGATTCCTGGGTATATTGGATTGTTTAGTAATTTGAAAACTTTAGATCTAAGCTTCAATGAATTGAGTGGTCCAATTCCAAATACATTTCAGAATCTAGACAGAGTTACTCGGTTCATGTTTTTGACAAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATCTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACTGGGTCCCCTGTTTCAAGTTGTCAACAGTCTGATGTGAACTTGGTTTCAAGTTATTCAACTACAATGAATAACACTGTTGCTTGGTGCTTGAGGAAGGATCTCCCTTGCCCAAGAGAAACGCGATTTCATTCCTTGTTCATAAATTGTGGAGGACAAAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGTAACTCCAGGTGGCAAATCCAATTTCATTTCTTTCTCTGATAGATGGGCTTATAGCAGTACTGGTGTTTTCCTGGGAGATGAGAATGCTAATTACAGAGAAACAAGTAGCAATGCATCTATTTCGAGCATCTACCGAACCGCTCGACTCGCACCTCTTTCGCTCAAGTACTATGGACTTTGTTTAAGAAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACATCTGACCAAACATTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTCAAAAAGATTTTAACATAATGGAGAAAGCTGGTGGTGTTGGGAAGAGCTTTATTCTAGAAGAGCCTAATATTTTGGTCAATGGAAGTACTCTTGAGATACACTTATATTGGGCTGGTAAAGGAACTACTGCCATTCCAGACAGAGGGGTGTATGGACCTTTGATATCTGGGATCACAGTCACACCAAACTTTGATGTGGAGACTGGAGGGCTATCAGCTGGAGCTATTGCTGGCATTGTTGTTGGTAGTTTCGTGTTTGTTGTGTTGGTATTGGCTGTTCTTAGATGGAAAGGTTATTTGGGTGGAAAGGACACTGAAGACAGTGAATTGAAGGCCCTAGATTTACAGACAGGTTATTTCAGTTTGAGACAAATCAAAACAGCCACCAACAATTTCGACCCGACCTATAAAATAGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGTGTATTGTCCGATGGTACTTCGATCGCGGTAAAGCAACTATCCTCTAAATCAAGACAAGGAAACCGTGAATTCGTCACTGAGATCGGCATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAATTATTGCTTGTTTATGAGTATCTAGAGAATAACAGTCTTGCCCGTGCTCTTTTTGGCGCGGAGGAGCACCGACTACACTTGGATTGGCCGATAAGAATGAAGATATGCTTGGGACTAGCAAAGGGATTGGCTTACCTTCATGAAGAATCTGTATTGAAAATTGTTCATAGAGATATAAAAGCTACCAATGTGTTACTTGATAAAAACCTGAATGCCAAGATTTCTGACTTTGGATTGGCTAGGCTTGATGAAGAAGAGAACACCCATATCAGCACAAGAATTGCTGGCACAATTGGTTACATGGCTCCTGAGTATGCAATGCGAGGCTACTTAACCGATAAAGCAGATGTTTATAGCTTCGGAGTTGTGGCTTTAGAGATTGTTAGTGGAAAAAGTAACACAAACTATAGGCCAAAAGAGGAATTTGTTTATCTTCTCGACTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTCGTTGATCCGAGTCTCGGCTCACATTACTCAAAAGAAGAGGTGACGAGGATGATTCATATAGCTCTGTTATGCACAAATCCATCTCCAACTCTTAGGCCATCTATGTCTTCAGTGGTTAGCATGCTTGAAGGAAAAATTGCGGTCCAAGCGCCGATCATAAAGCGCGGTGCAGTCGATCAAGATGCAAGGTTCAAAGCCTTTGAAAGACTGTCACAAGATAGCATAACAAGCATTTCAACATCATCACAAGGCATTCCAATGCAAAAAAGCATGTTGATTGATGGGCCCTGGATTGATTCCACTACTTCTTCTCATAACAAGGATGAAACTCAAGATTATTCTTCAACCACAAATCTCCTTTAG 3027 40.77 MVGTWDMDLAVLVYGFLLLNCFLEFGSHAQPLPDQEVRALQAISAELRNLNWNVHQNSCINGDGFFNRPILGTDIIREVNCTCTTVCSVTTIRLKGLNLTGTLPAAFGNLTKLQTIDLTRNLISGSIPREFAQIPLVDLSMLGNRLSGEIPPEIGDIATLEHLVLEDNLLGGNLPESLGRLSRLRRLLLSANNFNGTIPASYGNLKNLTDFRIDGNDVSGRLPEFIGNWTKLERLDIQGTSMETPIPSGISDLKNLTQLRITDLKGLPTSFPNLTQLTSLEELILRNCLIQDQIPGYIGLFSNLKTLDLSFNELSGPIPNTFQNLDRVTRFMFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNNTVAWCLRKDLPCPRETRFHSLFINCGGQRMEVDGNEYEEDVTPGGKSNFISFSDRWAYSSTGVFLGDENANYRETSSNASISSIYRTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLGERIFDISIQGNLVQKDFNIMEKAGGVGKSFILEEPNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVETGGLSAGAIAGIVVGSFVFVVLVLAVLRWKGYLGGKDTEDSELKALDLQTGYFSLRQIKTATNNFDPTYKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGAEEHRLHLDWPIRMKICLGLAKGLAYLHEESVLKIVHRDIKATNVLLDKNLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSHYSKEEVTRMIHIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRGAVDQDARFKAFERLSQDSITSISTSSQGIPMQKSMLIDGPWIDSTTSSHNKDETQDYSSTTNLL 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29438639 29447605 + CmPI595203_11g017290.1 Cmu11g1729 430251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1729 1008 Gene3D Ribonuclease Inhibitor 73 263 IPR032675 -
Cmu11g1729 1008 SUPERFAMILY RNI-like 92 364 - -
Cmu11g1729 1008 Gene3D Transferase(Phosphotransferase) domain 1 735 943 - -
Cmu11g1729 1008 MobiDBLite consensus disorder prediction 984 1008 - -
Cmu11g1729 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 265 - -
Cmu11g1729 1008 Pfam Protein tyrosine and serine/threonine kinase 664 930 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1729 1008 Gene3D Phosphorylase Kinase; domain 1 628 734 - -
Cmu11g1729 1008 CDD STKc_IRAK 665 932 - -
Cmu11g1729 1008 Pfam Malectin domain 407 585 IPR021720 -
Cmu11g1729 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Cmu11g1729 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 590 - -
Cmu11g1729 1008 ProSiteProfiles Protein kinase domain profile. 659 941 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1729 1008 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Cmu11g1729 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 955 IPR051824 -
Cmu11g1729 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1729 1008 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515(InterPro)
Cmu11g1729 1008 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Cmu11g1729 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 734 - -
Cmu11g1729 1008 Gene3D - 405 590 - -
Cmu11g1729 1008 Gene3D Ribonuclease Inhibitor 264 381 IPR032675 -
Cmu11g1729 1008 SMART serkin_6 659 930 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0997 Cmu-Chr7:24684644 Cmu11g1729 Cmu-Chr11:29438639 0.00E+00 dispersed
Cmu09g2157 Cmu-Chr9:37667281 Cmu11g1729 Cmu-Chr11:29438639 6.90E-149 dispersed
Cmu10g2905 Cmu-Chr10:35423622 Cmu11g1729 Cmu-Chr11:29438639 7.90E-92 dispersed
Cmu11g1727 Cmu-Chr11:29398884 Cmu11g1729 Cmu-Chr11:29438639 1.50E-212 dispersed
Cmu11g1729 Cmu-Chr11:29438639 Cmu11g0233 Cmu-Chr11:2800321 8.70E-72 dispersed
Cmu11g1728 Cmu-Chr11:29414431 Cmu11g1729 Cmu-Chr11:29438639 9.60E-201 tandem
Cmu11g1729 Cmu-Chr11:29438639 Cmu11g1730 Cmu-Chr11:29450308 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75958 PF07714 PK_Tyr_Ser-Thr 2.00E-49 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1729 - - - 0.0