Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1784 ATGTTGACTTCTTTTTCCCTTCTCAGTGTTTCTCATTATGTTAGCCTGTCGCCATTGCGTATCTTAGTTCCTCCAACCCGTCATATGTCTTATGTTGACACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTTATGTTTATATCAATTGTTCTTTTCATGAATTTGGATTCTGTTTCGTTGTCAAATCCATGGGTTTGGTTGAGGCAGTGGCAGCAAGATTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACTAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTTCAGTCTGGGCCGCCGCTTGATGAAATGTCAATTGCATGCATTTTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAACTCTGAAGGATATAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCAAAAGAGCTTCTGAAGCACCGATTCATTAAGAATGCCAGGAAGAGTCCCAGGCTTCAGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGAAGATGCAGAAACACCAACAAATGGTCCTAGAGCTATAGGTGAAACGTCAGACACTGTGAAAGTATCAAGAAATGTAAGAGATGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCAAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCTAGCTGCGTCTGGAAATGCACCACGCGACATATCAGAGAACACTAGAGATTCATACAGTATGGGAGATGCTAGTGAAGATGAAGAGTTAAGTGGTTCAGGAACCGTTGTGATCCGGTCTCCCAGGGGATATCAAGCATCTACTCAATTTCATAATGAAAGCAGTCCGTCTGGAAGTGCACAAGCATATTTTGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGACAACGTGATGATTCTGATTCTCCCCAGACTCCAAAATCCAGATTGGGAATTCAAGAAAGGACTTCAAGTTTGTCTCCTGAAGACAGTGCATCAAACCTTGCGGAGGCAAAAGCTGCAATTCAAGCAGGATTGAGAAAAGCTAATGCAAGAGATAGATCAGCTATCAATAAACTCAACGACAGGAAGGAAAACAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTTTTTGATGCGCCACGAGCATTGCTAAAACCATCTCTATCAATTGATGAGGAAGAAAGTGCAAAAATAGCATCGTCTTCTGCACCATTATCGGTTTTGTTTATGTCATCCTTGAAAGAGGTATTTGCAGATGATTCGGAAGGATCGCCTGCTCGTACTGTAATTAATGCACTTATCAATATGGAACACCAAAAACTTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCCAAGGAATCTTCACTGAAAGATTTACAAGACTTGGCAACTCGCTTATTCACTAAGGCAAAGACAGTTCCTGAAAATACACAAAATGTCACGGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCAAGGGATCTGAGTTCAGCTTAA 2271 41.52 MLTSFSLLSVSHYVSLSPLRILVPPTRHMSYVDTHLLYFGFKGCCALSYVYINCSFHEFGFCFVVKSMGLVEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLQERIRERPKYQIKEEDAETPTNGPRAIGETSDTVKVSRNVRDETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWLAASGNAPRDISENTRDSYSMGDASEDEELSGSGTVVIRSPRGYQASTQFHNESSPSGSAQAYFEDTSFSGTVVMRGQRDDSDSPQTPKSRLGIQERTSSLSPEDSASNLAEAKAAIQAGLRKANARDRSAINKLNDRKENRRTEQTVSSSDSSRHSREFFDAPRALLKPSLSIDEEESAKIASSSAPLSVLFMSSLKEVFADDSEGSPARTVINALINMEHQKLGSCEVLVTKLLQKLASSKESSLKDLQDLATRLFTKAKTVPENTQNVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSSA 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29931536 29946365 - CmPI595203_11g017840.1 Cmu11g1784 430306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1784 756 MobiDBLite consensus disorder prediction 570 589 - -
Cmu11g1784 756 MobiDBLite consensus disorder prediction 518 550 - -
Cmu11g1784 756 FunFam serine/threonine-protein kinase dst1 isoform X1 75 364 - -
Cmu11g1784 756 MobiDBLite consensus disorder prediction 564 601 - -
Cmu11g1784 756 MobiDBLite consensus disorder prediction 518 551 - -
Cmu11g1784 756 Gene3D Transferase(Phosphotransferase) domain 1 75 365 - -
Cmu11g1784 756 MobiDBLite consensus disorder prediction 707 732 - -
Cmu11g1784 756 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Cmu11g1784 756 MobiDBLite consensus disorder prediction 344 476 - -
Cmu11g1784 756 Coils Coil 104 131 - -
Cmu11g1784 756 Pfam Protein kinase domain 79 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1784 756 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 76 723 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Cmu11g1784 756 SMART serkin_6 78 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1784 756 SUPERFAMILY Protein kinase-like (PK-like) 76 362 IPR011009 -
Cmu11g1784 756 CDD STKc_MST3_like 77 350 - -
Cmu11g1784 756 ProSiteProfiles Protein kinase domain profile. 78 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1784 756 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0488 Cmu-Chr5:4108463 Cmu11g1784 Cmu-Chr11:29931536 2.60E-54 dispersed
Cmu05g0633 Cmu-Chr5:5417691 Cmu11g1784 Cmu-Chr11:29931536 2.00E-34 dispersed
Cmu10g2050 Cmu-Chr10:26273580 Cmu11g1784 Cmu-Chr11:29931536 1.30E-56 dispersed
Cmu11g1171 Cmu-Chr11:22544800 Cmu11g1784 Cmu-Chr11:29931536 1.70E-70 dispersed
Cmu11g1784 Cmu-Chr11:29931536 Cmu10g2059 Cmu-Chr10:26455886 1.20E-28 dispersed
Cmu11g1784 Cmu-Chr11:29931536 Cmu05g0923 Cmu-Chr5:8407934 3.00E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75960 PF00069 Pkinase 2.60E-68 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1784 K08838 - csv:101214412 1252.27