Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1788 ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCAGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCCCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACTTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA 852 42.49 MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29998819 30001290 + CmPI595203_11g017880.1 Cmu11g1788 430310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1788 283 PANTHER PROTEIN PHOSPHATASE 31 280 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu11g1788 283 Gene3D - 30 283 IPR036457 -
Cmu11g1788 283 SUPERFAMILY PP2C-like 31 283 IPR036457 -
Cmu11g1788 283 SMART PP2C_4 31 280 IPR001932 -
Cmu11g1788 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Cmu11g1788 283 CDD PP2Cc 43 282 IPR001932 -
Cmu11g1788 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Cmu11g1788 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2465 Cmu-Chr1:36599408 Cmu11g1788 Cmu-Chr11:29998819 5.20E-84 dispersed
Cmu10g1724 Cmu-Chr10:20087344 Cmu11g1788 Cmu-Chr11:29998819 9.50E-85 dispersed
Cmu11g0993 Cmu-Chr11:15672333 Cmu11g1788 Cmu-Chr11:29998819 1.30E-17 dispersed
Cmu11g1415 Cmu-Chr11:26375805 Cmu11g1788 Cmu-Chr11:29998819 1.10E-86 dispersed
Cmu11g1788 Cmu-Chr11:29998819 Cmu07g0296 Cmu-Chr7:2955514 1.00E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1788 K17506 - csv:101215129 535.798