Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1831 ATGGTGAAAATGAAGTTTGTTTCCATGTCTATGGTTATGTCTGTCGTCTTGTTCATGTGTATTGGATCTTACGCCTCTTTCACTCCCATTGATAACTATTTGATATCGTGTGGTTCTACACAAAACATCACCTTCCAAGGGAGAACGTTTGTTCCTGATTCTGGACATTCATTGCTCTCCAATGATGGTGAAAGCTCTGTTGTTGTTAGTTCAAAAGGCACTACTGCTCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACGAGCATTGCTTCGTATAAATTCGAAATCAAGAAAAAAGGCCGGCATTGGGTTCGATTGTATTTTTATCCTATTCCAAAGTCAGAGAAGAATCTTGCATCTGCATCAATTACTGTTGTTACTGAGAAGTTTGTGCTGTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTCACTTCAGATTCCTTGACCCTTACTTTCATTCCGTCCAATGGTTCTGTTTCATTTGTTAATGCGATTGAAGTTGTCTCGGTGCCTGATGAGCTGATACCTGACCAAGCATTGGCTTTGAATCCATCTGCTCCTTTTAGCGGTATCTCGGAACTTGCTTTTGAAACTGTTTACCGGCTGAATATGGGGGGTCCTTTACTCACTTCACAAAATGATACGCTTGGAAGGACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAACCCCAGGAGCATAAAATATCATGCCGGTGTGACACCAGAAACTGCACCAAATTGGGTTTATGCGACTGCCGATGCCATGGGAGACCCAAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTTCAATACTTTGTCAGAGTGCACTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTTTTCAATCTTTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTATCATTGTTAACCGGTGACTTAGGTGTGCCTTATTACAAAGACTTCATTTCCAACTCAGCAGATTCGACTACTTTGACCGTTAGTGTCGGTCCAGATACAATGGCAGACATCACCAATGCAACCATGAATGGATTGGAGATTATGAAGATAAGCAACCAAGCTGGGAGCTTGGATGGAACTTCATCTGTTGAAAGTCTTTTCCCAGATGCGCCTTCAAAGAAGAACAATATAGCAATCATTGTTGGTTGTGTCTTGGGAGCTGTAGTTGGCCTTGCTTTGCTCATCTTGTGTTATTGCTGTTACATAGGACGCAAGTCAAAGACTACTCAACCACCACACCCTTGGCTGCCTTTGCCCTTATATGGGAACTCTCAAACCATTACAAAAGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCATTTCTTTGGCTTCCTCCAGTCTCGGCAGATTCTTCACATTTCAGGAAATTCTTGATGCTACCAACAAATTTGACGAAAATCTGCTCCTTGGAGTTGGTGGTTTTGGTAGAGTTTACAAGGGAACACTTGAAGATGGTATGAAAGTTGCTGTTAAAAGAGGTAACCCCAGATCAGAACAAGGTCTTGCCGAATTTCGAACTGAAATTGAAATGTTATCAAAGCTCCGACATCGTCACCTAGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCAAATGGACCTCTCAGGAGTCACTTGTATGGAACAGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGGGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTTAAAACCACAAACATTCTCTTGGACGAGAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACGGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGGCGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTTGTGCTAATGGAAGTTCTCTGCACGAGGCCAGCGCTAAACCCTGTTCTGCCCCGAGAACAAGTCAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATTATGGACCCAAATCTGGTAGGTAAAGTTAATCCAGCATCACTTAAGAAGTTTGGTGAAACAGCTGAGAAGTGTCTGGCCGAGTATGGGGTTGACAGGCCATCTATGGGAGACGTCCTGTGGAACCTGGAATATGCTCTTCAGCTCGAGGAAACTTCATCTGCTCTAATGGAACCTGAAGACAACAGCACAAATCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAATAGTGTAAGCATGATTGATGGAGGGAACTCTGGCACCGACGATGATGCAGAAGATGCTGCAACAAGTGCAGTATTTTCACAGCTCGTAAATCCTCGTGGGAGATGA 2529 42.98 MVKMKFVSMSMVMSVVLFMCIGSYASFTPIDNYLISCGSTQNITFQGRTFVPDSGHSLLSNDGESSVVVSSKGTTAPSPIYQSARVFTSIASYKFEIKKKGRHWVRLYFYPIPKSEKNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELIPDQALALNPSAPFSGISELAFETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSANPRSIKYHAGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSLLTGDLGVPYYKDFISNSADSTTLTVSVGPDTMADITNATMNGLEIMKISNQAGSLDGTSSVESLFPDAPSKKNNIAIIVGCVLGAVVGLALLILCYCCYIGRKSKTTQPPHPWLPLPLYGNSQTITKVSTTSQKSGTASFISLASSSLGRFFTFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30481069 30483597 + CmPI595203_11g018310.1 Cmu11g1831 430353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1831 842 SUPERFAMILY Protein kinase-like (PK-like) 478 772 IPR011009 -
Cmu11g1831 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1831 842 Pfam Malectin-like domain 35 385 IPR024788 -
Cmu11g1831 842 SMART serkin_6 501 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1831 842 PANTHER OS07G0166700 PROTEIN 489 778 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cmu11g1831 842 CDD STKc_IRAK 507 772 - -
Cmu11g1831 842 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Cmu11g1831 842 FunFam Putative receptor-like protein kinase 32 183 - -
Cmu11g1831 842 Gene3D Transferase(Phosphotransferase) domain 1 577 794 - -
Cmu11g1831 842 Pfam Protein tyrosine and serine/threonine kinase 507 698 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1831 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1831 842 MobiDBLite consensus disorder prediction 806 827 - -
Cmu11g1831 842 FunFam receptor-like protein kinase FERONIA 463 576 - -
Cmu11g1831 842 FunFam Receptor-like protein kinase FERONIA 577 793 - -
Cmu11g1831 842 Gene3D - 206 387 - -
Cmu11g1831 842 Gene3D - 32 182 - -
Cmu11g1831 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524(InterPro)
Cmu11g1831 842 FunFam Receptor-like protein kinase FERONIA 207 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1669 Cmu-Chr2:30516638 Cmu11g1831 Cmu-Chr11:30481069 1.30E-177 dispersed
Cmu05g0937 Cmu-Chr5:8568841 Cmu11g1831 Cmu-Chr11:30481069 5.20E-208 dispersed
Cmu06g1650 Cmu-Chr6:27638867 Cmu11g1831 Cmu-Chr11:30481069 1.50E-237 dispersed
Cmu09g0219 Cmu-Chr9:2273735 Cmu11g1831 Cmu-Chr11:30481069 2.50E-224 dispersed
Cmu11g0493 Cmu-Chr11:5348750 Cmu11g1831 Cmu-Chr11:30481069 5.20E-123 dispersed
Cmu11g1333 Cmu-Chr11:25552158 Cmu11g1831 Cmu-Chr11:30481069 6.50E-162 dispersed
Cmu11g1831 Cmu-Chr11:30481069 Cmu10g1924 Cmu-Chr10:24654674 2.70E-66 dispersed
Cmu01g1663 Cmu-Chr1:30389611 Cmu11g1831 Cmu-Chr11:30481069 1.50E-14 transposed
Cmu01g2464 Cmu-Chr1:36596408 Cmu11g1831 Cmu-Chr11:30481069 9.80E-194 transposed
Cmu02g1359 Cmu-Chr2:27139669 Cmu11g1831 Cmu-Chr11:30481069 1.60E-180 transposed
Cmu02g2052 Cmu-Chr2:34154955 Cmu11g1831 Cmu-Chr11:30481069 4.40E-239 transposed
Cmu11g1831 Cmu-Chr11:30481069 Cmu08g0886 Cmu-Chr8:21118481 3.80E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75961 PF12819 Malectin_like 2.00E-39 CL0202 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1831 - - - 0.0