Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1883 ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCCTACGATCTCTTCAGTATCACTCCCATTATGACTCTCCTCGGACGTGTCTATTACCCTGACCAACACTACGACATTCCGGCCGCCGTCAAATCCGCTATGCTCGCGGTGGCTCTTCTGGGGACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGACAGAGTGGGAAGGCGGCGCGTGTACGGACTCGCATTGGCGCTCATGGTGGTGAGTTCCATCGACTGTGGATTCTCAATCTGCACCACCAGGAGCTGTGTCCTTGTGAGCCTAGGATTTTTCAGGTTCCTTCTGGGGCTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCTAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTCGGGATCTTGGCCAGCGCCACCGTCACCATGATCGTCTGCTCCATATTCGATCGCGCCTCTAACTACCCAACCAGTGATCGTACTCCGATGGGGGCCGATATTGCTTGGAGGCTGATTCTCATGCTCGGCGCTGTGCCGGCGGCGATGACTTATTATTGGCGAATGATGATGCCGGAAACTGCCAGATACACGGCTCTGGTTGAGAGGAATGTGGAACAAGCGGCAAAGGATATGGAAAAAGTGTTGGATGTGTCGTTGGTTGATATCACGGAAGACAGCCCTGTGCCCCCTTCTCCCCCAAATTTCTCCTTCTTTTCCAACCAATTTCTTCGCCGCCATGGCCGCGATCTCCTTTCCTGTGCCGCCTCCTGGTTCCTCGTCGACATCGTCTTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACCCAATTCCTTCCTTCCAACCAAAAATCCATCAACGTCTACCGTCAAGCCTTCAACGAAGCCAGACTCCAAGCCATCGTCGCCGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTTTTCATCGACCGTCTCGGCCGAGTCACCATCCAAATCCTCGGATTTCTCTTCATGGCCCTCGGCTATCTCCTCATCGCCATCCCCTACAACTCTTTCTGGGTCTCCGATAAACACAAATACGGTTTCATGCTATTCTACTGCCTCACATTCTTCTTCTCAAATTTCGGCCCCAACACCACCACTTTCATTCTCCCCGCCGAGCTCTTTCCCGCTAGGTTCCGTTCCACCTGCCATGGAATCTCCGGCGCCGCCGGAAAAATCGGGGCCATCATCGGAGCCGTGGGCTTCCTGTGGGCCTCGCACGACCGGAAGGACGGGGGAATTGGGATGAAGGCATCGTTGATGTTGCTTGGTGGGGTGAGTCTTGCGGGAGTGGCGGTCACGTATTTCTTCACCAGAGAAACCAATGGAAGGTCGTTGGAAGAGAATGAAAAGGAAGATGAATACGCTGGGATTTTGTTTCTCAGGTGCTTTCACTTTCACCCTCACCCTCACCACGCTACTGCTACTGCCTACTCCCGCCCGTCTGTTGCTCAACACGACGACATGTCGTCACGTTCTACCTCCAACTCCGTTCCAACTACTACCACACCAATTCATTATTAG 1656 53.74 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLLGRVYYPDQHYDIPAAVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVVSSIDCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMIVCSIFDRASNYPTSDRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVEQAAKDMEKVLDVSLVDITEDSPVPPSPPNFSFFSNQFLRRHGRDLLSCAASWFLVDIVFYSSNLFQSKIYTQFLPSNQKSINVYRQAFNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQILGFLFMALGYLLIAIPYNSFWVSDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRKDGGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENEKEDEYAGILFLRCFHFHPHPHHATATAYSRPSVAQHDDMSSRSTSNSVPTTTTPIHY 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30884757 30887347 - CmPI595203_11g018830.1 Cmu11g1883 430405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1883 551 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu11g1883 551 Gene3D MFS general substrate transporter like domains 17 502 IPR036259 -
Cmu11g1883 551 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 493 - -
Cmu11g1883 551 FunFam Inorganic phosphate transporter 1-6 17 501 - -
Cmu11g1883 551 Pfam Sugar (and other) transporter 23 494 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu11g1883 551 CDD MFS_PhT 22 485 - -
Cmu11g1883 551 MobiDBLite consensus disorder prediction 522 551 - -
Cmu11g1883 551 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 486 IPR020846 GO:0022857(InterPro)
Cmu11g1883 551 SUPERFAMILY MFS general substrate transporter 9 497 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0502 Cmu-Chr8:16668280 Cmu11g1883 Cmu-Chr11:30884757 2.10E-124 dispersed
Cmu11g1883 Cmu-Chr11:30884757 Cmu07g0156 Cmu-Chr7:1487656 1.20E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1883 K08176 - csv:101218554 920.998