Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g1887 | ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCAAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAAGATGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCTGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA | 939 | 46.54 | MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30902079 | 30903920 | + | CmPI595203_11g018870.1 | Cmu11g1887 | 430409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g1887 | 312 | SMART | serkin_6 | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g1887 | 312 | FunFam | Cyclin-dependent kinase 2 | 102 | 311 | - | - | |
Cmu11g1887 | 312 | Pfam | Protein kinase domain | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g1887 | 312 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 100 | - | - | |
Cmu11g1887 | 312 | PANTHER | CELL DIVISION PROTEIN KINASE | 14 | 304 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER) | |
Cmu11g1887 | 312 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 308 | IPR011009 | - | |
Cmu11g1887 | 312 | ProSiteProfiles | Protein kinase domain profile. | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g1887 | 312 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 311 | - | - | |
Cmu11g1887 | 312 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu11g1887 | 312 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524(InterPro) | |
Cmu11g1887 | 312 | FunFam | Cyclin-dependent kinase B2,2 | 10 | 100 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g0659 | Cmu-Chr4:20510532 | Cmu11g1887 | Cmu-Chr11:30902079 | 3.10E-121 | dispersed | |
Cmu05g2220 | Cmu-Chr5:31720131 | Cmu11g1887 | Cmu-Chr11:30902079 | 8.10E-95 | dispersed | |
Cmu08g1576 | Cmu-Chr8:27496866 | Cmu11g1887 | Cmu-Chr11:30902079 | 2.80E-35 | dispersed | |
Cmu10g0958 | Cmu-Chr10:1510455 | Cmu11g1887 | Cmu-Chr11:30902079 | 1.70E-51 | dispersed | |
Cmu10g2165 | Cmu-Chr10:27700712 | Cmu11g1887 | Cmu-Chr11:30902079 | 1.20E-43 | dispersed | |
Cmu11g1394 | Cmu-Chr11:26135550 | Cmu11g1887 | Cmu-Chr11:30902079 | 6.60E-70 | dispersed | |
Cmu11g1887 | Cmu-Chr11:30902079 | Cmu03g2235 | Cmu-Chr3:30980116 | 2.30E-47 | dispersed | |
Cmu11g1887 | Cmu-Chr11:30902079 | Cmu02g1621 | Cmu-Chr2:30018491 | 1.60E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75963 | PF00069 | Pkinase | 7.50E-71 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g1887 | K07760 | - | csv:101208001 | 624.78 |