Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0063 ATGACGCTCTCCTTCCCATTTACTTCATTTTGTATCTCTCTTCTATTCTTCTCAGTTCCTCTCTGTTCAACTCTCAATTCAGATGGTCTCTCACTTCTCGCACTCAAAGCCGCCATTGAGACGGACCCAACTCGGGTACTCGACTCATGGTCGGAGTCAGATTCGACCCCTTGTCACTGGTCGGGAATCGTCTGCACTCGCAACCGAGTCACTCAACTCGCTCTCCCCAACAAAGGCTTCACGGGCTACATCCCGTCTGAACTCGGTCACCTTAACTCGCTCAAACGACTCAGTCTCGCTCACAACAACTTCTCTAAACCCATTCCTTCTCGTTTATTCGACGCCACAACTCTCATTGTTCTCGACCTCTCTCACAACTCGTTCTCCGGTCAAGTCCCCGATCAGATCAAGAACCTCAAAAACCTCCGGCATTTGGATTTATCGTCGAATCTTCTCAACGAGTCGTTACCGGTCAGCGTCGTTCAGCTCACCGACCTCGTCGGAACACTGAACTTGTCGTTCAACCAGTTCTCCGGCGGAGTACCGGCTTCGTATGGTGATCTTCCGGTGTTTTTGAATCTCGATCTCCGACACAACAATCTCACCGGGAAAATCCCTCAGGTGGGGTCCTTGTTGGACCAGGGGCCCACAGCTTTTTACGGTAACCCAGGACTATGTGGGTTTCCTCTTCATGCATTATGCCCAGAAGCTCAAAATCCTCGGGTCTTCCCAAAATACCCTCAGAACCCAAATCATAGCTCCCCAAACGTCGGTGACAGACCGGCGAAACAGAAATCCAGCAGCGGGTCGGTGATCTTGTCGCTGATTTCAGGCGTTTCGGTCCTGGTCGGAGTCGTTTCCGTTTCGGTCTGGTTGTTGCGGAGAAAAGGGAACTCCGAAGAGGGCAAAACGGGAAAAGAAAACATACAGGGATTCGAGGGGGTAGTCGTTGACGAGGAAAGGCAGAAGGGTAAATTCATGCTGATAGACGAGGGGTTCGATTTTGAATTAGAGGATTTGTTGAGGGCGTCTGCTTACGTGGTTGGGAAGAGTTGGAGTGGGATTGTTTACAAGGTGGTGGTGCGTAGAGAGCGGGGATCAGGTGTGGCCGCACCTACGATTGTTGCAGTGAGGAGATTGAGTGAAGGAGACGCCACGTGGCGGTTGAAGGAGTTTGAATCCGAGGTGGAGGGTATTGGGAGGATCCAACACCCGAATATCGTACGGTTAAGAGCTTACTACTATGCGCATGATGAGAAATTACTGGTCACTGATTTCATCCGAAACGGGAATTTGTGGGCCAAACTTCACGAAGAAGATCCATCGCCCAGTTCTTCAACACCGTTATCGTGGGCTACGCGGTTAAAAATCGCGCAAGGAATCGCCCGTGGTTTAACTAGTATTCACGATTCTACACCTCGAAAGTTTGTCCATGGCAACATAAAGTCAACAAAAATCCTTCTTGACGATGATCTCCAAGCTTACATCTCCGGTTTTGGACTAGACGGCCTTGTGTCCGGAACTTCTAAATATTCCAGCATTCCCTCTAAGAAGTTGACAAGCTCTCTAACGGGCCGGCAAATTTCAAAGTCATCCGTTATGTACTTAGCACCGGAGGTTCGGTTTTCTGGGGCCAAGTATACACAGAAGAGCGACGTATACTCATTTGGGATTGTGCTTTTGGAGATATTAACGGGTAAGGGACCGGATTTTGGAGGGCCTGAAAATGATGGTAGAGGATTAGAGAGTTTTGTGAGGAGGGCATTCAGGGAAGAGCATCCACTTTCCGAGGTTATTGACCCGAAACTGATTCATGAGATATCTGCGAAGAAACAGGTTCTGAAGACATTTCATGTTGCCCTCAATTGCACGGAAATCGATCCGGAGGTTCGGCCGAGGATGAGGATGGTTTCAGAGAGTCTCGATGGCATCTTGTAA 1938 49.38 MTLSFPFTSFCISLLFFSVPLCSTLNSDGLSLLALKAAIETDPTRVLDSWSESDSTPCHWSGIVCTRNRVTQLALPNKGFTGYIPSELGHLNSLKRLSLAHNNFSKPIPSRLFDATTLIVLDLSHNSFSGQVPDQIKNLKNLRHLDLSSNLLNESLPVSVVQLTDLVGTLNLSFNQFSGGVPASYGDLPVFLNLDLRHNNLTGKIPQVGSLLDQGPTAFYGNPGLCGFPLHALCPEAQNPRVFPKYPQNPNHSSPNVGDRPAKQKSSSGSVILSLISGVSVLVGVVSVSVWLLRRKGNSEEGKTGKENIQGFEGVVVDEERQKGKFMLIDEGFDFELEDLLRASAYVVGKSWSGIVYKVVVRRERGSGVAAPTIVAVRRLSEGDATWRLKEFESEVEGIGRIQHPNIVRLRAYYYAHDEKLLVTDFIRNGNLWAKLHEEDPSPSSSTPLSWATRLKIAQGIARGLTSIHDSTPRKFVHGNIKSTKILLDDDLQAYISGFGLDGLVSGTSKYSSIPSKKLTSSLTGRQISKSSVMYLAPEVRFSGAKYTQKSDVYSFGIVLLEILTGKGPDFGGPENDGRGLESFVRRAFREEHPLSEVIDPKLIHEISAKKQVLKTFHVALNCTEIDPEVRPRMRMVSESLDGIL 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 374393 376743 + Conep10aG0006400.1 Cone10ag0063 445861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0063 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 641 IPR046959 -
Cone10ag0063 645 MobiDBLite consensus disorder prediction 244 265 - -
Cone10ag0063 645 MobiDBLite consensus disorder prediction 241 265 - -
Cone10ag0063 645 SMART LRR_typ_2 139 163 IPR003591 -
Cone10ag0063 645 SMART LRR_typ_2 91 115 IPR003591 -
Cone10ag0063 645 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515(InterPro)
Cone10ag0063 645 Gene3D Ribonuclease Inhibitor 25 167 IPR032675 -
Cone10ag0063 645 Gene3D Ribonuclease Inhibitor 168 236 IPR032675 -
Cone10ag0063 645 SUPERFAMILY Protein kinase-like (PK-like) 347 641 IPR011009 -
Cone10ag0063 645 ProSiteProfiles Protein kinase domain profile. 342 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0063 645 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Cone10ag0063 645 FunFam Leucine-rich repeat receptor-like kinase 30 135 - -
Cone10ag0063 645 FunFam Leucine-rich repeat receptor-like protein kinase 141 236 - -
Cone10ag0063 645 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Cone10ag0063 645 Gene3D Transferase(Phosphotransferase) domain 1 427 645 - -
Cone10ag0063 645 Pfam Protein tyrosine and serine/threonine kinase 348 640 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0063 645 SUPERFAMILY L domain-like 22 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0063 Cone-Chr10:374393 Cone19ag1118 Cone-Chr19:8033697 9.89E-108 dispersed
Cone10ag0063 Cone-Chr10:374393 Cone3ag0078 Cone-Chr3:451120 6.30e-311 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81793 PF00625 Guanylate_kin 8.30E-59 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0063 - - - 0.0