Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0067 | ATGACGATAATCAGGATCGGTTGTAGTAATAAAGACAACGGAGCTTATGATTTGGGAGAATTAGATCAAGCACTTTTTCTTTATCTTGATGCTCAAGACCCCCCCTCCACCTCTACAACTGCTCCTTATGACCTAAAACAGAGCTCAGGCGGTGGGATGAGACCTCCGACGTTGAACATTTTCCCATCGCAGCCTATGCACGTAGTACAGCCCTCATCTTCAACAAAAGTTAGTACGGTATTAGTTTCTCCGGGGAATAGCGGATCGAAGAGATTAGCGGAGCCGTTGAGCATGGAGATGGCGAATCCGGGAGCCGCTGCATCTGGAGCTGGACCTGAACCTACCAAAACTATCAAGCGTCAGGGTAACAGCAAAGGTCAGCCTTCGAGTTCGGAGCAGGAAGGACCTAAGACACAGGATCCAAAGACGTTGAGGAGGCTTGCACAGAATAGAGAGGCAGCAAGGAAAAGCAGACTGAGAAAGAAGGCATATGTACAGCAATTAGAGTCGAGTAGGATTAAGCTTACCCAGCTAGAGCAAGAGCTACAGCGAGCCAGACCCCAGGGCATGTTCTTAGGAGGAGGAGGAGGACCCTTTTTAGGAGGAGAGCAAGACGTTGGTATGGCCAATATTAGTTCCGACACGGCGATGTTTGACATGGAGTATGCACAGTGGTTGGAGGAGCACCACCACCTAACGTGTGAGCTCCGGGCGGCGGTGCAAGAGCATTTGCCGGAGAACGAGCTGAGAATGTTTGTAGAGAATTGCGTAGCCCATTACGATGAACTTATGAACCTAAAAGGCATGGTGGCTAAATCAGACGTGTTTCATCTTGTTTCCGGCACGTGGAAGACTCCCGCCGAGCGTTGTTTAATGTGGATTGGTGGGTTTAGGCCATCTGACCTCATCAAAGTAATTATGGGTCAAATAGATCCACTGACGGAGCAGCAGATATTAGGTATCTATGGGTTACAGCAATCAACTCAAGAAGCTGAAGAAGCTCTGTCTCAAGGCCTTGAAGCCCTAAATCAATCTTTGTCGGAAACCATAACCTCTGATTCCTTGAGCTCACCTCCTAACATGACCAACTACATGGCTCAGATGGCCGTCGCCATTAACAAGCTCTCCAACGTTGAAACCTTTGTTCGACAGGCAGATAATTTAAGGCACCAAACCATTCACCGGCTACACCAGATCTTAACGAGCCGTCAAATGGCAAGGTGTTTGTCAGCAATGGCGGAATACTTCCATCGTCTTCGAGCTCTCAGTTCACTTTGGTTAGGTCGGCCTCGCCATGCATAG | 1302 | 48.69 | MTIIRIGCSNKDNGAYDLGELDQALFLYLDAQDPPSTSTTAPYDLKQSSGGGMRPPTLNIFPSQPMHVVQPSSSTKVSTVLVSPGNSGSKRLAEPLSMEMANPGAAASGAGPEPTKTIKRQGNSKGQPSSSEQEGPKTQDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQELQRARPQGMFLGGGGGPFLGGEQDVGMANISSDTAMFDMEYAQWLEEHHHLTCELRAAVQEHLPENELRMFVENCVAHYDELMNLKGMVAKSDVFHLVSGTWKTPAERCLMWIGGFRPSDLIKVIMGQIDPLTEQQILGIYGLQQSTQEAEEALSQGLEALNQSLSETITSDSLSSPPNMTNYMAQMAVAINKLSNVETFVRQADNLRHQTIHRLHQILTSRQMARCLSAMAEYFHRLRALSSLWLGRPRHA | 433 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 388728 | 392320 | - | Conep10aG0006800.1 | Cone10ag0067 | 445865 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0067 | 433 | Coils | Coil | 161 | 185 | - | - | |
Cone10ag0067 | 433 | MobiDBLite | consensus disorder prediction | 67 | 86 | - | - | |
Cone10ag0067 | 433 | CDD | bZIP_HBP1b-like | 142 | 188 | - | - | |
Cone10ag0067 | 433 | SMART | brlzneu | 138 | 224 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0067 | 433 | Pfam | Seed dormancy control | 233 | 307 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone10ag0067 | 433 | ProSiteProfiles | DOG1 domain profile. | 215 | 429 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone10ag0067 | 433 | Pfam | bZIP transcription factor | 142 | 182 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0067 | 433 | Gene3D | - | 141 | 189 | - | - | |
Cone10ag0067 | 433 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 140 | 184 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0067 | 433 | MobiDBLite | consensus disorder prediction | 67 | 144 | - | - | |
Cone10ag0067 | 433 | FunFam | BZIP family transcription factor | 141 | 190 | - | - | |
Cone10ag0067 | 433 | MobiDBLite | consensus disorder prediction | 117 | 137 | - | - | |
Cone10ag0067 | 433 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 145 | 160 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0067 | 433 | SUPERFAMILY | Leucine zipper domain | 142 | 184 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0067 | 433 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 56 | 432 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0067 | Cone-Chr10:388728 | Cone18ag0202 | Cone-Chr18:998637 | 3.76E-110 | dispersed | |
Cone10ag0067 | Cone-Chr10:388728 | Cone13ag0546 | Cone-Chr13:5710710 | 3.61E-183 | wgd | |
Cone10ag0067 | Cone-Chr10:388728 | Cone19ag0496 | Cone-Chr19:4105973 | 8.03E-183 | wgd | |
Cone10ag0067 | Cone-Chr10:388728 | Cone3ag0081 | Cone-Chr3:472652 | 7.09E-213 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44148 | PF00709 | Adenylsucc_synt | 9.60E-71 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0067 | K14431 | - | rcu:8277515 | 604.749 |