Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0186 | ATGCCTTTCCGGAGATCGAACTACACTCTCCTAAATCAAACACCTGACGAAGTGGCAGGAGCGGGATCTGCGACGTTGTTTTACGAGTCCCTGTCCGGAGAGGGAAAGAACAGTAATACAAAGACGGAGAGAGGTTTTGATTGGGAAACAGGTGGTGGTGATCATAAGGTGAGCCAACCTGGGAATCGGATCGGCAACCTCTTCTCGTCGAGTGGTTTACAGAGGCAGTCGAGTGGAAGCAGCTTCGGTGAAAGCTCTTTTTCCGGGGATTATTATGCCTCGACGCTCTCTGGCTATACGCAAGACGATGTGGTCAGAGTCGGAGGAGGTGAGTTAAGAGTCAAAGGAATGGAGTCTTCCGGCGAACAGGAAAGTTCGTCGGGGAAGAGCTGGGCCCAGCAGACGGGAGAGAGTTATCAGCTGCAGTTGGCTTTGGCGTTACGACTTTCGTCTGACGCTGCCAGTCCGAATGATCCTAATTTTTTGGATCCGATGCCCGATGAAGCGTCCTCAAGAACTTCCTCTATCTCGGCTGAGGCCTTGTCTCATCGATTTTGGGTAAATGGCTGCTTGTCATACTCTGATAAAGTTCCTGACAGATTTTATCTAATTCATGGGATGGATCCATATGTCTGGTCTATGTGCACTGATCTGCAAGAAAATGGCCGTCTTCCATCAATCGAGTCACTGAAGTCCATTGATCCTAGCTTTGATTCTTCAGTTGAGGTTGTTTTGTTTGATCGATGCAGCGATGCCTTCTTAATTGAACTTCAAAATAGGGCCCACAACATTTCTTGTAGCTGTGTGACAAAAGAAGAGGTTGTGGATCAGCTCGCGAAACTTGTATGCAACCACATGGGAGGCTCATTTTCAACAGGAGAAGACAACTTAGTTTCCATCTGGAGGGAATGCAGTGATGCCCTAAAACATCGTTTAGGATCTGTCATCCTTCCCATTGGCAGCCTATCAGGCGGCCTTTGCAGACATCGTGCTCTACTATTCAAAGTGCTAGCAGACACAATTGATTTACCATGTCGTATAGCAAAGGGCTGTCAGTATTGCACAAGAAACGATGCTTCCTCTTGTCTTGTCCGATTTGGGATTGACAGGGAGAATATGATTGATTTGATTTCAAAGCCAGGTTGCTTATGCCAGCCTGATTCTTTGCTCAATGGTCAATCATCCATCTCAATTTCTTCACCACTGCGCTTTCCACATCCAAAAGCAGCTGAACCTTCCATTGATTTCAGGTCACTGGCCAAACAGTACTTCTTGGATTGTCAATCGCTTAACATCGTATTTGATGAAGTTTCCACAGGAAATGTTTTTGATAGAGAAAATTCTGCATTACCCAGGGATATGCAGTTGGATAGGAAGGGAATAGACCGAAACAGCATAGTGCCTACTGGTGGTGCAGATGATGAAAGTTCTCAGTTGCTGTATCCGAAGGTTACTGAATCAAGTACCAATAATAGAGAGTCCCTGCCATTCAAGTCATGTGATTCTTCAAATGATGTTATAAACTCAATAACCATGGTCAAAGATCCAGTACCCACTGAGCATATCTCACACAATGTTCAACCACTTATAGCATTGTCTCATCGAAGAATGGGTTCTGCTATGGACTCGAGATTTTTCAAGGGAGGTGAATCGGTCCCTAGTGAAGCAAGCAAAGATCTTCCCCATGATGTAGAGGATTTAAACATTCCATGGAGTGATCTTCAATTGATAGAGATAATTGGATCAGGTTCTTTTGGAACTGTCCATCGTGCTGACTGGCATGGTTCGGATGTTGCAGTGAAGATTCTCATGGAACAGGACTTCCACCCTCAACGCATTAACGAATTTCTGAGGGAGGTTGCCATAATGAAACGCCTTAGACACCCAAACATTGTTCTCTTTATGGGTGTGGTCACTCAGCCTCCAAACTTGTCAATTGTCACAGAATACTTATCAAGGGGTAGCTTGTACAGGTTTTTGCATAAAGGTGGAGGGAGGGAGATGTTAGATGAGAGGCGTCGATTAAGTATGGCTTTTGATGTGGCAAAGGGAATGAATTATCTTCATAGGCGTAATCCTCCGATTGTTCACCGCGATTTGAAATCCCCAAATCTTTTGGTCGACAGAAAGTTTACAGTGAAGGTCTGTGATTTTGGTCTTTCCAGGTTAATGGCTAACACATTTCTCTCATCAAAGTCAGCTGCTGGGACTCCAGAATGGATGGCACCAGAAGTCCTTCGTGATGAGCCATCAAATGAAAAGTCAGATGTTTATAGTTTTGGTGTAATTTTGTGGGAGCTTACAACATTAAGACAACCGTGGGGTAACTTAAACCCAGCACAGGTTGTGGCGGCTGTAGGTTTTAAGGGAAAAAGGCTTGAGATTCCACGCGATTTAAATCTTCAAGTGGCTTCTATCATAGAATCCTGCTGGGCAGATGAGCCCTGGAAACGCCCATCATTTTCCACTATAATGGAATGTTTGAGGCCATTGATCAAAACACCCACTACATCTCGTCGAAGTCGTCCAGATATGCCCTCAATTACCTGA | 2550 | 44.9 | MPFRRSNYTLLNQTPDEVAGAGSATLFYESLSGEGKNSNTKTERGFDWETGGGDHKVSQPGNRIGNLFSSSGLQRQSSGSSFGESSFSGDYYASTLSGYTQDDVVRVGGGELRVKGMESSGEQESSSGKSWAQQTGESYQLQLALALRLSSDAASPNDPNFLDPMPDEASSRTSSISAEALSHRFWVNGCLSYSDKVPDRFYLIHGMDPYVWSMCTDLQENGRLPSIESLKSIDPSFDSSVEVVLFDRCSDAFLIELQNRAHNISCSCVTKEEVVDQLAKLVCNHMGGSFSTGEDNLVSIWRECSDALKHRLGSVILPIGSLSGGLCRHRALLFKVLADTIDLPCRIAKGCQYCTRNDASSCLVRFGIDRENMIDLISKPGCLCQPDSLLNGQSSISISSPLRFPHPKAAEPSIDFRSLAKQYFLDCQSLNIVFDEVSTGNVFDRENSALPRDMQLDRKGIDRNSIVPTGGADDESSQLLYPKVTESSTNNRESLPFKSCDSSNDVINSITMVKDPVPTEHISHNVQPLIALSHRRMGSAMDSRFFKGGESVPSEASKDLPHDVEDLNIPWSDLQLIEIIGSGSFGTVHRADWHGSDVAVKILMEQDFHPQRINEFLREVAIMKRLRHPNIVLFMGVVTQPPNLSIVTEYLSRGSLYRFLHKGGGREMLDERRRLSMAFDVAKGMNYLHRRNPPIVHRDLKSPNLLVDRKFTVKVCDFGLSRLMANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELTTLRQPWGNLNPAQVVAAVGFKGKRLEIPRDLNLQVASIIESCWADEPWKRPSFSTIMECLRPLIKTPTTSRRSRPDMPSIT | 849 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 905888 | 911967 | - | Conep10aG0019100.1 | Cone10ag0186 | 445984 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0186 | 849 | CDD | STKc_MAP3K-like | 580 | 826 | - | - | |
Cone10ag0186 | 849 | Gene3D | Phosphorylase Kinase; domain 1 | 567 | 652 | - | - | |
Cone10ag0186 | 849 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 122 | 831 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone10ag0186 | 849 | FunFam | Serine/threonine-protein kinase CTR1 | 653 | 838 | - | - | |
Cone10ag0186 | 849 | MobiDBLite | consensus disorder prediction | 62 | 84 | - | - | |
Cone10ag0186 | 849 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 178 | 384 | - | - | |
Cone10ag0186 | 849 | ProSiteProfiles | Zinc finger SWIM-type profile. | 253 | 294 | IPR007527 | GO:0008270(InterPro) | |
Cone10ag0186 | 849 | FunFam | Serine/threonine-protein kinase isoform 1 | 564 | 652 | - | - | |
Cone10ag0186 | 849 | SUPERFAMILY | Protein kinase-like (PK-like) | 560 | 828 | IPR011009 | - | |
Cone10ag0186 | 849 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 695 | 707 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | Gene3D | Transferase(Phosphotransferase) domain 1 | 653 | 841 | - | - | |
Cone10ag0186 | 849 | ProSitePatterns | Protein kinases ATP-binding region signature. | 580 | 601 | IPR017441 | GO:0005524(InterPro) | |
Cone10ag0186 | 849 | MobiDBLite | consensus disorder prediction | 31 | 84 | - | - | |
Cone10ag0186 | 849 | SMART | serkin_6 | 574 | 832 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | Pfam | Protein tyrosine and serine/threonine kinase | 574 | 828 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 648 | 661 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 799 | 821 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 755 | 777 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 736 | 746 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 689 | 707 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0186 | 849 | ProSiteProfiles | Protein kinase domain profile. | 574 | 832 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0186 | Cone-Chr10:905888 | Cone7ag0865 | Cone-Chr7:6610121 | 2.20E-198 | dispersed | |
Cone10ag0186 | Cone-Chr10:905888 | Cone13ag1213 | Cone-Chr13:9357152 | 0 | wgd | |
Cone10ag0186 | Cone-Chr10:905888 | Cone16ag0263 | Cone-Chr16:2923665 | 1.97E-47 | wgd | |
Cone10ag0186 | Cone-Chr10:905888 | Cone19ag1198 | Cone-Chr19:8377949 | 0 | wgd | |
Cone10ag0186 | Cone-Chr10:905888 | Cone3ag0203 | Cone-Chr3:1052705 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81797 | PF05577 | Peptidase_S28 | 5.00E-42 | CL0028 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0186 | K14510 | - | cit:102612580 | 1127.08 |