Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0189 ATGGCGGCAACGAAGGGACTGCTGATGTACAAGATATACAGAGCGCTAAGCTACGGTCTCTCACCGTTTCTGTATCTTCACCTCCGATGGAGAACTCTTCGAGGTCTCGAACATCGACTCCATTGGCCGGAGCGTCTTGGCCGCCCTTCCCTCCCTCGCCCTCCCGGTCCACTTCTCTGGTTCCACGCCGTCTCATTAGGTGAAGGAATGGCTGCTATTCCAGTAATCAAGCATAGTATGCAGCAGAGGCCTGACTTAATCATTTTGATGACGACAACAGCAGTTTCTGCCTTTGAAGTAATAAAGAACCGGCTTCCAGTTGGTGTCATATATCAGTTTTTGCCAATTGATACCCCTGCTGCAGTGGACGCTTTCCTTCACTACTGGAAGCCAAATTCCATCATTATAATGGAGAATGAACTTTGGCCAAATCTTATCTTGAGCGCTTCAAAACATGGTATTGCTCTGGCATTGATAAATGCCAGGATGTCTGCAAGATCATTTAAGCATTGGTCAAGGCCGTTGTTTCTCCCACTGATATCTATAATGCTGTCAAAATTTTCATTGATAGTGCCATTGAGCACTTTGCAGGCAATCCGCTATCAGCTGCTGCAGGCCCCACCTTCTGTCATAAACTTTTCTGGCGACTTGAAATTTGCAGTTGAAAATGTTGGAATCTCTGCGGGACAGTTAAGGAATGTAGAAGATCTGAGAGCAGAGCTTGGCCACAGGCAGGTTTGGATGGTTTCTTCCATACATAGGGGTGAAGAAGAAGTAATGCTAGAAGTTCACAAAACTCTCTTGCAACAATACCCTGATCTGGTCATTATCATTGTGCCTCGCCATCCACAATATGGAAAGGAGATCGCTCAAAAATTGCAGAAAGAAGGGAAAAATGTAGCTTTGAGGTCTAAAGACAGAAAACTAGCGCCAGGAACAAATATATATGTGGCTGACACGTTAGGTGAATTGAGATACTTGTATGGGATAACTCCTATTGCTGTAGTCGGAGGCTCCTTCTTGCCTGGTCTGGCTGGTCATAATATGTCAGAAGCTGCAGCAGCGGGTTGTGCTGTTTTGACTGGTCCTCATATCGGGCACTTCTCACAAATGGCACTGGAAATGCAGCGTGCCAATCCTTTGTCCGTTCTTCAGGTTCATGGAAAACTAGACCTTGAAGAATCTCTTAGAGAGCTCCTTAGCGATAAAAGTGTTCTAGAAGCACGTAGAAATGCTGCTAAACAAGCACATCATGCCCTGGCAAGTGGTATTGTTTCCAACGTTTGGAATTTACTGAACTTTCATGTTCTCCGACGCGCGCTGTCTTAA 1329 45.6 MAATKGLLMYKIYRALSYGLSPFLYLHLRWRTLRGLEHRLHWPERLGRPSLPRPPGPLLWFHAVSLGEGMAAIPVIKHSMQQRPDLIILMTTTAVSAFEVIKNRLPVGVIYQFLPIDTPAAVDAFLHYWKPNSIIIMENELWPNLILSASKHGIALALINARMSARSFKHWSRPLFLPLISIMLSKFSLIVPLSTLQAIRYQLLQAPPSVINFSGDLKFAVENVGISAGQLRNVEDLRAELGHRQVWMVSSIHRGEEEVMLEVHKTLLQQYPDLVIIIVPRHPQYGKEIAQKLQKEGKNVALRSKDRKLAPGTNIYVADTLGELRYLYGITPIAVVGGSFLPGLAGHNMSEAAAAGCAVLTGPHIGHFSQMALEMQRANPLSVLQVHGKLDLEESLRELLSDKSVLEARRNAAKQAHHALASGIVSNVWNLLNFHVLRRALS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 927576 932740 + Conep10aG0019500.1 Cone10ag0189 445987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0189 442 Gene3D - 39 219 IPR038107 -
Cone10ag0189 442 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 6 440 IPR039901 GO:0005886(PANTHER)|GO:0009245(PANTHER)|GO:0016740(InterPro)|GO:0016740(PANTHER)
Cone10ag0189 442 Coils Coil 389 416 - -
Cone10ag0189 442 FunFam 3-deoxy-D-manno-octulosonic acid transferase 41 219 - -
Cone10ag0189 442 Pfam 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 41 220 IPR007507 -
Cone10ag0189 442 Gene3D Glycogen Phosphorylase B; 230 417 - -
Cone10ag0189 442 FunFam 3-deoxy-D-manno-octulosonic acid transferase 230 418 - -
Cone10ag0189 442 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 67 423 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0189 K02527 - csv:101207342 631.713