Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0190 ATGGCGATGAACAAAGAGGAGAAGAAGGCGAATGCTGATCACTTTATCTTCCCCATTCTCCTCTTCTTCTTCTTCTTCTTTTTATCCTTCTCTTCCCTATCCTCTTCTTCTCATCTACCTCCTCCAAACGATACCGTTGCTCTCACCAACTTCCGTCTCCTCACAGATACACACGGCAACCTACTCTCCAACTGGACTGGCCCTGACGCCTGCTCCGCCACCTGGCATGGTGTCCACTGCACCTCCACCGGCCGTGTCTCTGGCCTCTCCCTCCCTTCCCTCAACCTCCGAGGACCCATTCTTTCTCTCTCACCACTCGACCAGCTCCGCCTCGTTGACCTCCACGACAACCGCTTAAACGGCACAATCTCACCACTCACTAACTGCACCAACTTAGTCCTCATCTACCTCGCCGGAAACGACTTATCAGGCGAGATCCCATTGGAAATATCCTCCTTGAAAACTCTCACCCGCCTCGACCTTTCAGACAACAACATCCATGGCTCTATCCCTGACCAGTTATCCCATCTCACTCTTCTCATCACTCTTCGTTTGCAGAACAATTTACTATCCGGAAAAATCCCAGATTTCTCTGCTTCTCTAACCAATCTTAAGGAGGTCAATCTAACCAACAACGAGCTTAATGGAAAACTACCAGACGGTTTATTAACAAAATTCGGTTACAAAAGCTTTTCTGGAAATGAAGGGCTATGTGGGTCTGGGGCCGGGGCTGGACCAAGCCGATTACAAGTTTGTACAGCATCACCATCATCTATAAACAATTCAGATGAAAAAACTTTCCCATTAAAACCAAACTCGTTTCCTCAAAAGCCCTTGCTTAGCCAGACAGATAGACAAAATCATAGAGGGCTAAAATCCGGAGTAATAGTCGCAATCGTGATAGCAACGTCTGTGGCATTGTTGGTAACTATCTCCTTCTTCGTGGCCTATTGCTGTGCAAAAGACCGGAACAATTCGAATTCAAATCATGGGAGTGAAGTAGGGAAGAAGAGAAGCTATGGAAGTAGTACTAATGGGAGTGAGAAGAAGGTCTACTCAAACGGAGATGGAGATAGTGATGGGACAAATGTTACAGACCGAAGTAAGCTTGTATTTTTTGACCGGAAGAAGGGCTTTGAGCTGGAAGACCTGCTCCGAGCATCGGCTGAGATGGTTGGAAAAGGGAGCCTTGGGACAGTCTATAGGGCTGTGCTAGATGATGGGTGCACCGTAGCAGTTAAGAGATTGAAAGACGCGAACCCATGTGGGAGAAAGGAGTTTGAGGAGTATATGGAGATAATTGGGAGGGTAAGGGATAAGCATATTGCAAGGCTTAGAGCTTACTATTATGCTAAGGAAGAGAAGCTTCTTGTTTATGACTTTCTCTCTAATGGCAGCTTGCATTCTCTTCTACACGGGAATAGGGGACCTGGAAGAGTTCCATTGGATTGGACTACAAGAATAAGCTTGGTCTTAGGAGCTGCTCGTGGGCTTTCTAGGATCCATGAAGAGTACAGTGAATCGAAAATACCACATGGAAATGTGAAATCTTCAAACGTCCTACTCGACAAGAATGGTGTGGCGTGCATTTCGGATTTCGGGCTGTCTCTACTTCTCAGTCCGGCCCATGCCATAGCAAGACTAGGAGGCTACAAAGCACCCGAACAATCCGAAACAAAGAAGCTCTCTCAGGAAGCGGATGTGTACAGCTTTGGTATCCTGTTATTGGAAGTGCTTACAGGCCGGTTTCCTTCTCTCCGGGCTGGTGGAGATGACCCGGCATTGGACCTTCCAAAGTGGGTCCGGTCTGTGGTGAAGGAAGAGTGGACAGCTGAAGTATTTGATCAAGAGCTTTTGAGGTACAAGAACATCGAGGAGGAGCTTGTGTCTATGCTCCACCTGGGCTTGGCTTGTGTGGCTGAGCAGCCCGAAAAGAGGCCCACTATGCCGGAAGTTACCAAGATGATCACTGAAATAAGGGTCGAGCAATCTCCTCTCGGTGAAGAACAGGACGAGTCTCGTAACTCGCTTTCACCTTCCATCCCGACTACTGATGATGGGCTGGTTTAA 2070 47.78 MAMNKEEKKANADHFIFPILLFFFFFFLSFSSLSSSSHLPPPNDTVALTNFRLLTDTHGNLLSNWTGPDACSATWHGVHCTSTGRVSGLSLPSLNLRGPILSLSPLDQLRLVDLHDNRLNGTISPLTNCTNLVLIYLAGNDLSGEIPLEISSLKTLTRLDLSDNNIHGSIPDQLSHLTLLITLRLQNNLLSGKIPDFSASLTNLKEVNLTNNELNGKLPDGLLTKFGYKSFSGNEGLCGSGAGAGPSRLQVCTASPSSINNSDEKTFPLKPNSFPQKPLLSQTDRQNHRGLKSGVIVAIVIATSVALLVTISFFVAYCCAKDRNNSNSNHGSEVGKKRSYGSSTNGSEKKVYSNGDGDSDGTNVTDRSKLVFFDRKKGFELEDLLRASAEMVGKGSLGTVYRAVLDDGCTVAVKRLKDANPCGRKEFEEYMEIIGRVRDKHIARLRAYYYAKEEKLLVYDFLSNGSLHSLLHGNRGPGRVPLDWTTRISLVLGAARGLSRIHEEYSESKIPHGNVKSSNVLLDKNGVACISDFGLSLLLSPAHAIARLGGYKAPEQSETKKLSQEADVYSFGILLLEVLTGRFPSLRAGGDDPALDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHLGLACVAEQPEKRPTMPEVTKMITEIRVEQSPLGEEQDESRNSLSPSIPTTDDGLV 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 933889 936281 + Conep10aG0019600.1 Cone10ag0190 445988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0190 689 FunFam Nuclear pore complex protein NUP107 42 196 - -
Cone10ag0190 689 Gene3D Phosphorylase Kinase; domain 1 361 461 - -
Cone10ag0190 689 Pfam Protein tyrosine and serine/threonine kinase 390 654 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0190 689 CDD STKc_IRAK 392 659 - -
Cone10ag0190 689 MobiDBLite consensus disorder prediction 661 689 - -
Cone10ag0190 689 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Cone10ag0190 689 ProSiteProfiles Leucine-rich repeat profile. 155 178 IPR001611 GO:0005515(InterPro)
Cone10ag0190 689 ProSiteProfiles Protein kinase domain profile. 386 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0190 689 MobiDBLite consensus disorder prediction 259 285 - -
Cone10ag0190 689 Gene3D Ribonuclease Inhibitor 194 240 IPR032675 -
Cone10ag0190 689 PANTHER OS05G0588300 PROTEIN 21 670 IPR050994 -
Cone10ag0190 689 SUPERFAMILY L domain-like 41 223 - -
Cone10ag0190 689 MobiDBLite consensus disorder prediction 326 360 - -
Cone10ag0190 689 Gene3D Transferase(Phosphotransferase) domain 1 462 680 - -
Cone10ag0190 689 SUPERFAMILY Protein kinase-like (PK-like) 390 656 IPR011009 -
Cone10ag0190 689 Gene3D Ribonuclease Inhibitor 42 193 IPR032675 -
Cone10ag0190 689 Pfam Leucine Rich Repeat 156 177 IPR001611 GO:0005515(InterPro)
Cone10ag0190 689 Pfam Leucine Rich Repeat 203 222 IPR001611 GO:0005515(InterPro)
Cone10ag0190 689 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 462 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0190 Cone-Chr10:933889 Cone13ag0812 Cone-Chr13:7457178 1.55E-117 dispersed
Cone10ag0190 Cone-Chr10:933889 Cone16ag0255 Cone-Chr16:2817920 6.10E-93 wgd
Cone10ag0190 Cone-Chr10:933889 Cone19ag1206 Cone-Chr19:8418148 7.11E-242 wgd
Cone10ag0190 Cone-Chr10:933889 Cone3ag0198 Cone-Chr3:1023787 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81798 PF00160 Pro_isomerase 5.00E-20 CL0475 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0190 - - - 0.0