Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0197 ATGAGAGTCAGTGAAGGCCTCTGGCTAAACCAGTCACTCCCTTTCAATATCACTTCATCAAACACAGTCTTCTTCTTCAACTGTTCCCCTCGCCTCTTAGTCTCCCCTCTCAATTGCACTCCTTCTAGCCTTTGTCATCAGTACTTGGAAAGCTCAGGCCATGTTGACTCAAAACGAGCCAGTCAGTGTGTTGATGATCATCTTGGCCTTTGTTGTACATTCACCCCAGGTGGGATGCCTTCGGCGTATAAGATAAGGCTTCATGATTCTGGCTGTAAAGCATTCAGAAGCATCCTTCATCTGGATATTAAAAAACCGACAAATCAATGGCAGGAGGGTTTGGAAATTCAATGGGCTTCTCCATCTGAGCCAGTTTGTACCTCACAGCTTGATTGCTATGGAGCTTCCAAATGTTCACCTACTGGTGTTAATGGCCTCTCCCGGTGCCTTTGCAATAAAGATTATCATTGGGACCATGTTCTTGGAACATGTTGTAAAAGGAAGAGAAGTGGTACTAAATTTGGTCTTAGATTGAAGCTCTTGACCAGCTTAGTCTCATTTTTCTCATTGGCCATTGTTACGGCTACAGTCTCAGCAAGAAAGTCCTTCAGAGTTATAAAGCAAGCAAACCTCTCCAAGGTAAGAGAAAACATTTTGAAATCAACGAATGGTGGGAAACCATCTCCGATGTATAGCTTGAAAGAAGTAAAGAAATCTACACATAATTTCTCCAAAGATAGACTTCTTGGAAGTGGCGGCTTTGGAGAAGTATACAAAGGTGAACTTCGAGATGGAACTGTTGTGGCAGTGAAATCGGCTAAAGTTGGTAATATCAAAAGCACCCAACAGGTGCTCAATGAGGTTGGGATACTTTCTCAAGTGAATCATAAGAACCTAGTGAGACTCTTGGGTTGTTGTGTAGAATCCAAGCAGCCTTTAATGATCTATGAGTTCATCTCAAACGGGACTCTCTATGACCATTTACATGGAAAGTCTCCAACCTTTCTTGACTGGAAAACAAGGGTGAGAATTGCCTTACAAACTGCTGAGGCATTGGCATATCTACACTATGCGGTTCACACTCCCATTTACCATAGAGACGTGAAGTCCACAAATATACTACTCGACGATGAGTTCAATGTGAAAGTTGCAGATTTCGGGCTCTCCAGATTGGCTAGCCCAGGGTTAAGCCACGTCTCGACTTGTGCTCAGGGAACATTAGGGTACTTGGACCCTGAATACTATCGTAATTATCAATTAACTGAAAAGAGTGATGTTTATAGCTATGGGGTTGTTTTACTCGAGCTTTTGACTTCCCAGAAGGCCATTGATTTCTCGCGTGATGAAGATAATGTTAACTTAACCGTTTATGTGACCGAGCGGGTTAATAGTGGGGGGGCTGTGGAAGTTGTTGATCGGAGGTTGATCAACGATGAGTGTGAGTGTGATTTACCGGTCAGTGTAAAGCTCTTCTTGGAGCTTGCTGTTTCTTGTCTAAGGGAGAAGAAAGGTGAAAGACCCGGAATGAAAGAGATTGTTCAAGAACTTGAATCCATTCAGATTGTAGATTCTCAGAATCAAGATAAAAATTAG 1593 42.69 MRVSEGLWLNQSLPFNITSSNTVFFFNCSPRLLVSPLNCTPSSLCHQYLESSGHVDSKRASQCVDDHLGLCCTFTPGGMPSAYKIRLHDSGCKAFRSILHLDIKKPTNQWQEGLEIQWASPSEPVCTSQLDCYGASKCSPTGVNGLSRCLCNKDYHWDHVLGTCCKRKRSGTKFGLRLKLLTSLVSFFSLAIVTATVSARKSFRVIKQANLSKVRENILKSTNGGKPSPMYSLKEVKKSTHNFSKDRLLGSGGFGEVYKGELRDGTVVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVESKQPLMIYEFISNGTLYDHLHGKSPTFLDWKTRVRIALQTAEALAYLHYAVHTPIYHRDVKSTNILLDDEFNVKVADFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTEKSDVYSYGVVLLELLTSQKAIDFSRDEDNVNLTVYVTERVNSGGAVEVVDRRLINDECECDLPVSVKLFLELAVSCLREKKGERPGMKEIVQELESIQIVDSQNQDKN 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 981687 985123 + Conep10aG0020300.1 Cone10ag0197 445995
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0197 Cone-Chr10:981687 Cone11ag1152 Cone-Chr11:8836063 7.94E-181 dispersed
Cone10ag0197 Cone-Chr10:981687 Cone3ag0218 Cone-Chr3:1158158 1.25E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81799 PF13844 Glyco_transf_41 1.10E-24 CL0113 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0197 - - - 0.0