Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0272 ATGGCTGCTGAGACCGGACATGAGATTCTTCCCCCAGCGTTCGAAGCCGACGCCGAGCAGCCTCCTTTGTTCGACGGAACCACAAGGCTGTATGTTTCTTACACATGCCCCTTTGCACAGCGTGTTTGGATCACCCGAAACTATAAGGGACTCCAAGAGAAGATCAAGTTAGTTGCTCTGAACCTTCAAAACAGACCTACTTGGTACAAGGAGAAAGTCTACCCACAAAACAAGGTGCCAGCTTTGGAACATAATGGGAAAGTGATTGGGGAAAGTCTTGACTTGATCAAATATGTTGATAGCAACTTTGAAGGGCCTTCTCTTTACCCAGATGATCCAGCTAAAAGACAATATGGTGAAGAGCTACTGTCATACACTGATACATTCACCAGAGAAGTGTTTACTTCATTCAAAGGGGACCCAGTTAAGCAAGCTGGTGCTCAGTTTGATTACTTGGAAAATGGTCTTCACAAATTTGATGATGGACCTTTCTTCCTAGGCCAATTCAGTTTGGTGGACATAGCCTATGTACCTTTTGTTGAAAGATTCCAAATCTTCTTAGCCGAAGTGTTTAAGTACGACATTACGGAGGGAAGGCCTAAACTCGCCGCTTGGATTGAGGAGATCAACAAGTTTGATGCTTATAAGCCAACAAAACCTGATCCTAAAGAGCTTGTCGAAGTTTACACGAAGCGGTTCTCGGAAGAACATGACTCAGTCGCTCTTCACCTCTGTTTACATGTGGCTGACCTCACGGTGGCCGCTGTTGACTTATGCTTTCACCTGGATGGCGCTTTCGCTGTTAACAGTGGGGGTGGCGGCGTCATTTTCACGAGAGATGGCATTTGCATCAGCCATCTCTCCATCTTCATCCTTCTCGTGACAGTGCAAATCGGACGGCATCCTTAG 909 46.2 MAAETGHEILPPAFEADAEQPPLFDGTTRLYVSYTCPFAQRVWITRNYKGLQEKIKLVALNLQNRPTWYKEKVYPQNKVPALEHNGKVIGESLDLIKYVDSNFEGPSLYPDDPAKRQYGEELLSYTDTFTREVFTSFKGDPVKQAGAQFDYLENGLHKFDDGPFFLGQFSLVDIAYVPFVERFQIFLAEVFKYDITEGRPKLAAWIEEINKFDAYKPTKPDPKELVEVYTKRFSEEHDSVALHLCLHVADLTVAAVDLCFHLDGAFAVNSGGGGVIFTRDGICISHLSIFILLVTVQIGRHP 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1296589 1306037 - Conep10aG0028000.1 Cone10ag0272 446070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0272 302 FunFam Lambda class glutathione S-transferase 105 236 - -
Cone10ag0272 302 CDD GST_C_Lambda 112 229 - -
Cone10ag0272 302 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 250 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cone10ag0272 302 Pfam Glutathione S-transferase, C-terminal domain 144 207 - -
Cone10ag0272 302 Gene3D Glutaredoxin 1 104 - -
Cone10ag0272 302 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Cone10ag0272 302 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Cone10ag0272 302 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Cone10ag0272 302 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Cone10ag0272 302 SFLD Main (cytGST) 29 210 - -
Cone10ag0272 302 Gene3D - 105 236 - -
Cone10ag0272 302 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Cone10ag0272 302 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0272 Cone-Chr10:1296589 Cone3ag0300 Cone-Chr3:1547738 4.24E-120 dispersed
Cone1ag1330 Cone-Chr1:56437501 Cone10ag0272 Cone-Chr10:1296589 2.29E-108 wgd
Cone10ag0272 Cone-Chr10:1296589 Cone13ag1302 Cone-Chr13:9718133 8.14E-129 wgd
Cone10ag0272 Cone-Chr10:1296589 Cone3ag0299 Cone-Chr3:1542745 4.23E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0272 K00799 - vvi:100261962 385.185