Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0284 ATGCCGAGAAAAGGTATGAGGAGTCTCTGCTTCCATTCCAAAACTCGTCATGATTCCAATTCCCATAATCATGCAACCACCTCATCGATTCCGTCAACTCCTGCTCGCCAGAGCTTCTCCGAATCGATGATCGATAAGATCATTGAATCGGCTGAGGCGATGATCACGAAATGGAATCCAGATGCTTCCACTTACGCCAAAGTTACTTCCATATTCTTCGAGAGCAAAACGGAAGCGTTACAGTTCATCAAGTGCGTTAACGATCTCCAGAAATCCATGCATTTTCTGGTATCCGAAAATTCAAATTCGGAGAAACTCGTGCAGGCTCAGACTCTCATGGAGATCGCGATGAAGCGGCTTCAGAAGGAGTTCTATCAAATTCTCTCCATGAATAGGGCTCACCTCGATCCGGAATCAGTTTCTACACGATCATCGCGTGCCTCAGCCAGATCGAGCACTTCCGATTATGAAGATGAAGGTACACCAGACGACGAGGTTCGAATCGCAGGTGATTCCATCACCGAAGTCGAGGAGGTTTCTTCCATAGCCATGGCCGATCTGAAGGCCATAGCCGAATGCATGATCTCTTCCGGTTACGCTAAAGAGTGCCTAAACATTTACAAAATTATTCGGAAATCGATAATCGATGAAGGAATCTACCGACTCGGAGTTGAGAAAATCAGCAACTCTCATTTCAGTAAGATGGATTGGGAAGCTATCGATTTCAGAATAAAAAACTGGTTGGAGGCTGTAAAAATCGCTATGAGAGCGCTCTTCAAGGGAGAACGAATTCTGTGCGACCATGTGTACGGTTCCTCTGAAACAGTTAGAGATTCTTGCTTCGCTGATATTTCAAAAGATGGCGCGATGCTTCTCTTTTCACTTCCTCAATTTGTCGCGAAGAGCAAGAAACAGTCATCGAGGGAAAAGATTTTCCGTTTGCTCGACATGTATACGGCGATATACGAAACTTGGCCAGATATTGAATCCATCTTCTCGTACGAATCCACCTCGCCAGTCCGATTGCAAGCTGAAACCTCACTCGTCCGAATCGCTGAGTCGGTTCACACGATGCTTTCGGAATTCCAAACGTCGATTCAGAAGGAATCTACGAAATCACCTGTCGCCGGCGGTGGAGTTCACTCGTTAACTCTTCGCACGATGGATTACCTCTCTACTCTCTCCGATTACACTAACGCCCTCACTTTCATTTTGGCAGACTCTCCACCGCCGGAAAATTCATTCATGCTCGAATATCACTTCGATAGTCTAGAATCCGATGACTCTCCCGCTCCGGCGATCTCTTTACGCATGGCATGGATCATCTTAGTCCTCATCTCTAAGCTCGACGTCAAAGCAAAATACTACAACGACGTGTCACAATCGTATCTATTCCTGGCAAATAACATCCGACATATCGTCTTGAAAGCACGCACGTCGAACCTCCAACACGTACTCGGCGAACGGTGGATCACAAAACACGAGGGGAAGGTGAAACAGTTCGCCGCGAATTACGAGCGGTTAGCGTGGGGCCAGGTATTCTCATCGTTACCAGATCAAAATTCAACGGCCGAGATATCACCGGCGGAAGCAATGCAGTTGTTTAAGAAATTCAATTCGTCTTTTCAAGAAGCTTACCTGAAACAAGGATTATGCACCGTGCCGGATCCGAAACTCCAAGACGATATCAAGGAAGCCATTGCGAACAAGATAACGCCGGTATATCGAAAGTTTTATAATGCTCACAGGCTTAGAGTGGAGCGGGAGACAGCGGGTATGAATATTATCAGATACGCCCCTGAAGAAGTTGATAATTATTTATCGGACCTATTCTTTGGATCGGCCGAGTCGAGTGGAAATTCGTCTTCTTCTTCTGTATTCTCACCGTCTCATCACCGACGGTCTTGTTGTGACAACTGA 1920 46.3 MPRKGMRSLCFHSKTRHDSNSHNHATTSSIPSTPARQSFSESMIDKIIESAEAMITKWNPDASTYAKVTSIFFESKTEALQFIKCVNDLQKSMHFLVSENSNSEKLVQAQTLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRASARSSTSDYEDEGTPDDEVRIAGDSITEVEEVSSIAMADLKAIAECMISSGYAKECLNIYKIIRKSIIDEGIYRLGVEKISNSHFSKMDWEAIDFRIKNWLEAVKIAMRALFKGERILCDHVYGSSETVRDSCFADISKDGAMLLFSLPQFVAKSKKQSSREKIFRLLDMYTAIYETWPDIESIFSYESTSPVRLQAETSLVRIAESVHTMLSEFQTSIQKESTKSPVAGGGVHSLTLRTMDYLSTLSDYTNALTFILADSPPPENSFMLEYHFDSLESDDSPAPAISLRMAWIILVLISKLDVKAKYYNDVSQSYLFLANNIRHIVLKARTSNLQHVLGERWITKHEGKVKQFAANYERLAWGQVFSSLPDQNSTAEISPAEAMQLFKKFNSSFQEAYLKQGLCTVPDPKLQDDIKEAIANKITPVYRKFYNAHRLRVERETAGMNIIRYAPEEVDNYLSDLFFGSAESSGNSSSSSVFSPSHHRRSCCDN 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1348849 1350768 - Conep10aG0029200.1 Cone10ag0284 446082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0284 639 MobiDBLite consensus disorder prediction 618 639 - -
Cone10ag0284 639 MobiDBLite consensus disorder prediction 138 164 - -
Cone10ag0284 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 38 614 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone10ag0284 639 MobiDBLite consensus disorder prediction 618 632 - -
Cone10ag0284 639 MobiDBLite consensus disorder prediction 22 37 - -
Cone10ag0284 639 Pfam Exocyst complex component Exo70 N-terminal 48 129 - -
Cone10ag0284 639 Pfam Exo70 exocyst complex subunit C-terminal 245 609 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone10ag0284 639 MobiDBLite consensus disorder prediction 13 37 - -
Cone10ag0284 639 SUPERFAMILY Cullin repeat-like 48 611 IPR016159 -
Cone10ag0284 639 Gene3D Exocyst complex component Exo70 61 620 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0284 Cone-Chr10:1348849 Cone20ag1348 Cone-Chr20:8666061 4.06E-94 dispersed
Cone1ag0674 Cone-Chr1:6316183 Cone10ag0284 Cone-Chr10:1348849 2.02E-209 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone11ag1101 Cone-Chr11:8582489 1.83E-168 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone11ag1266 Cone-Chr11:9409923 7.71E-205 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone13ag1312 Cone-Chr13:9740457 9.21E-231 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone18ag0321 Cone-Chr18:1595951 8.25E-198 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone18ag0474 Cone-Chr18:2306911 8.26E-171 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone19ag1300 Cone-Chr19:8771675 1.30E-228 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone3ag0313 Cone-Chr3:1592344 0 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone5ag1180 Cone-Chr5:5298449 1.03E-207 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0284 K07195 - rcu:8261785 745.732