Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0293 ATGAATATCCAGAAATGTAGATGGTTTGATACTAGCAAGCCATTCTTGGCTGTGGTATTCTTGCAATTTGGTCTAGCTGGAATGGACATCTTGTCTAAGGCTGCACTGAACCAGGGAATAAGCAATTACGTGCTTGTTGTCTACCGCCACATCATTGCTACAGCTGTCATCGCTCCTTTTGCAATAATCTTGGACAAGAAATTAAGGCCAAAGATGTCACTAGCTGTGTGTAGCAAAATAATGATGCTAAGCTTGCTTGAACCAGTTATGGATCAGAATCTGTATTACCTGGGAATGAACTACACATCAGCAACATTTGCAGCAGCTATGAGCAACATTCTTCCAGCCATAACTTTCATAATGGCCTGGATACTTAAGCTTGAGAATATACAGTTTAAAAGCATCAGGAGCCAAGCTAAGATGGTGGGTACTCTAACAACAGTTGCCGGAGCTATGGTCATGACATTGATAAAAGGACCAATCATTGAACTGTTTTGGACGAAACAAAGAACAGAACATGAGCAGCAAAGGGTTCAGACAAGTCTCCAAAATACAATTAAGGGTTCTTTAATGATAACAGTTGGTTGCTTCTGCCAGGCTTGTTTCATGAACCTTCAAGCAATAACCTTAAAAGCATACCCTGCTGAGCTTTCTCTTACAGCATGGATATGTCTGTTCGGAACGGTCGAAGGAACTGCCGTGGCACTTGTGATGGAAAGAGGGAAAACTGCAATCTGGTCAATAGGATGGGGAACAAAATTACTGGCAGCTGTCTATAGTGGAATATTCTGCTCTGCACTAGCCTATTACATTCAAGGAGTGGTCATGAAGGTAAGAGGTCCAGTTTTTGTGACAGCTTTTAGTCCCTTGAGCATGGTCATTGTTGCTATCCTGAGCTCGTTCATATTGGGTGAATGTTTGTATCTTGGAAGGATAATGGGAGCTCTTGTCATTATTTTGGGTCTGTATCTTGTTGTTTGGGGTAAAAGCAAAGACCAGACCCCAATTGCTTCAACAGATGAGCAGATGTTACCAGCCCCCCAGGCAATAGATGCAGATGACTGTAGAAAGGATAGAATCAATCATGAGAGCATCACGATTGAGGCATCTGAAGGTGGAATTATAACTAGAAATGAAGATTCTATCCCAACAGGAATCCATGTACACCCTGATTGTTTGACTCTATGA 1188 41.92 MNIQKCRWFDTSKPFLAVVFLQFGLAGMDILSKAALNQGISNYVLVVYRHIIATAVIAPFAIILDKKLRPKMSLAVCSKIMMLSLLEPVMDQNLYYLGMNYTSATFAAAMSNILPAITFIMAWILKLENIQFKSIRSQAKMVGTLTTVAGAMVMTLIKGPIIELFWTKQRTEHEQQRVQTSLQNTIKGSLMITVGCFCQACFMNLQAITLKAYPAELSLTAWICLFGTVEGTAVALVMERGKTAIWSIGWGTKLLAAVYSGIFCSALAYYIQGVVMKVRGPVFVTAFSPLSMVIVAILSSFILGECLYLGRIMGALVIILGLYLVVWGKSKDQTPIASTDEQMLPAPQAIDADDCRKDRINHESITIEASEGGIITRNEDSIPTGIHVHPDCLTL 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1389563 1391333 - Conep10aG0030100.1 Cone10ag0293 446091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0293 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 331 - -
Cone10ag0293 395 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Cone10ag0293 395 Pfam EamA-like transporter family 23 154 IPR000620 GO:0016020(InterPro)
Cone10ag0293 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cone10ag0293 395 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0293 Cone-Chr10:1389563 Cone4ag1395 Cone-Chr4:11243721 3.13E-120 dispersed
Cone10ag0293 Cone-Chr10:1389563 Cone11ag1117 Cone-Chr11:8677300 2.33E-129 wgd
Cone10ag0293 Cone-Chr10:1389563 Cone13ag1320 Cone-Chr13:9780093 1.87E-171 wgd
Cone10ag0293 Cone-Chr10:1389563 Cone18ag0463 Cone-Chr18:2241742 5.78E-130 wgd
Cone10ag0293 Cone-Chr10:1389563 Cone19ag1306 Cone-Chr19:8813105 5.14E-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0293 - - - 0.0