Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0300 ATGGCAGTGAATATAACCGCCATCAAAACCTCCTCCGATGGCGTCTGGCAAGGCGATAATCCGCTTGATTACGCCTTCCCTCTCCTAATCCTTCAGACTACCTTAATCCTTGTTGTCTCTCGCTTCCTCGCTTTTCTCCTCAAACCCCTCCGCCAGCCTAAAGTCATAGCGGAAATAGTTGGAGGGGTTTTACTCGGTCCATCTGCTTTTGGACGAAACGAAGTGTACATGCACCGAATCTTTCCTTCATGGAGCACGCCGATACTAGAATCTGTCGCGAGTATCGGACTCGTCTTTTTCCTATTTCTCGTTGGTCTCGAGCTAGATCTTAGTTCGATTCGCCGGAGTGGGAGAAGAGCGTTCGGGATAGCATTGGCCGGAATCTCACTCCCTTTCATTTGCGGAATCGGCGTCGCATTTGTCCTCCGTAAATCCGTTGACGGAGCAGATAAAGTCGGTTACGGTCAGTTCCTCGTGTTCATGGGAGTGGCGTTATCAATAACCGCTTTCCCTGTCTTAGCTCGCATTTTAGCCGAGCTTAAATTACTTACGACTCAGGTCGGAGAAACCGCCATGGCCGCGGCCGCGTTCAACGACGTCGCCGCCTGGATCTTACTAGCTCTCGCCGTCGCGCTCGCCGGGAACGGGGACGGTGGAGACCAAAAGAGTCCTTTAATTTCTGTTTGGGTGCTTCTCTCAGGCGTCGCATTTGTCGCGTTCATGATGATTCTGATCCGACCGGCGATGAGATGGGTGGCGAGACGGTGCTCGTCGGAGCACGACTCCGTCGACGAAGCCTATATCTGCTTGACCTTAGCCGGAGTCTTAGTCTCTGGCTTCATGACTGACTTGATCGGAATCCACGCGATATTTGGCGCGTTTGTTTTCGGTCTGACGATTCCAAAAGGGGGAGATTTTGCAGAGAGATTGATAGAGAGAATTGAGGATTTCGTATCGGGTCTGCTTCTCCCGCTCTATTTCGCGTCGAGCGGGTTGAAGACTAACGTGGCAAAGATACGTGGCGCGAAGGCGTGGGGCCTGTTTGCGTTAGTTATATCAACGGCCTGTGCGGGTAAGATTTTGGGCACTTTTCTGGTAGCGCTCATGTTTATGATCCCCGCTCGAGAGTCGCTCGCTCTTGGTGTGCTCATGAACACCAAAGGCTTGGTGGAGCTCATTGTCCTCAATATTGGCAAGGAGAAAAAGGTTCTGAATGATGAAATGTTTGCTATATTAGTCCTAATGGCCCTTTTCACCACCTTCGTCACAACTCCCACCGTCATGGCCATCTACAAGCCAGCCCGAGGTATTGCAGCTCAGTCCCACCGTAAACTCCGTGACTTCACCGCCATCTCGGACTCTAAAGGCGAGCTAAGGATCCTTGCCTGCGTCCATGGGCCCGGAAATGTGCCTTCACTCATTAGCCTCATTGAGTCAACTAGGAGCACTAAACACTCCCTTGTCAAGCTCTTCATCATGCACCTTGTGGAACTCACTGAACGAACCTCTTCGATAATCATGATTCGACGGGTTCGTAAGAATGGTTTCCCTTTTTTCTCTAGAATTCGTTACGGTGAGTGGCATGATCGTGTAGCTGGAGCCTTTCAAGCTTACAGTCAATTGGGCCGAGTCACGGTCCGGCCCACAACGGCAATCTCACCCTTGTCAACCATGCACGAGGATATTTGCCACGTGGCGGAAGAAAAGAGGGTGACGATGATCATCTTACCTTTTCATAAACAGTGGAGAGGGGACAGTGATGAGACGATGGAGAATGTGGGCCATGAATGGAGAGGAGTCAACCAAAGAGTGTTGAAAAATGCTCCCTGTTCGGTAGCAATGCTTGTGGACCGCGGATTTGGTGGTTCTGGAGCCCAGACTCCTGGGCCCAATACAATAACCCAACGGATCTGTGTCATGTTTTTCGGTGGGCCTGATGATCGTGAAGCCTTGGAGTTAGCTGGGCGTATGGTTGAGCACCCGGCAGTTAAAGTGACCGTTACTCGGTTCGTTGACAAACAGGGATCAAGGACAAACGGTATTGTACTACGGCCCGCACCAACAAAATCCAGGGAAGAGAGCTATAGCTTTTCCACAGCTAAAATCAACCGGGAAAAAGAAAAGGAGCTAGATGATACATGCGTATCAGAGTTCCGTAGCAAATGGGATGGAGTGGTAGAGTACATGGAGAAGGTAGATAACAACATTGTGGAGGAGGTATTGGCGATCGGACGTAACGGTGATTTTGATCTGATAGTGGTCGGGCGGGGCCGCTTCCCATCAACAATGGTGGCAGAGCTGGCAGATTGTCAGGCCGAGCATGCTGAGTTGGGACCCATTGGAGACAGGTTAGCATCGGCCGGTCAGGGTGTAGTGTCTTCAGTGCTTGTAATTCAACAACATGATGCAGCTCACATAGAGGAGACTCCTGTGTCGAAGATATCTCATGCCCATTACGAGAAGTTCACAGTAGATGAATCCTCATCTAGTGTTACAGAGATTTCAAAAGTGCTTGTATAA 2520 50.48 MAVNITAIKTSSDGVWQGDNPLDYAFPLLILQTTLILVVSRFLAFLLKPLRQPKVIAEIVGGVLLGPSAFGRNEVYMHRIFPSWSTPILESVASIGLVFFLFLVGLELDLSSIRRSGRRAFGIALAGISLPFICGIGVAFVLRKSVDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGNGDGGDQKSPLISVWVLLSGVAFVAFMMILIRPAMRWVARRCSSEHDSVDEAYICLTLAGVLVSGFMTDLIGIHAIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTNVAKIRGAKAWGLFALVISTACAGKILGTFLVALMFMIPARESLALGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFVTTPTVMAIYKPARGIAAQSHRKLRDFTAISDSKGELRILACVHGPGNVPSLISLIESTRSTKHSLVKLFIMHLVELTERTSSIIMIRRVRKNGFPFFSRIRYGEWHDRVAGAFQAYSQLGRVTVRPTTAISPLSTMHEDICHVAEEKRVTMIILPFHKQWRGDSDETMENVGHEWRGVNQRVLKNAPCSVAMLVDRGFGGSGAQTPGPNTITQRICVMFFGGPDDREALELAGRMVEHPAVKVTVTRFVDKQGSRTNGIVLRPAPTKSREESYSFSTAKINREKEKELDDTCVSEFRSKWDGVVEYMEKVDNNIVEEVLAIGRNGDFDLIVVGRGRFPSTMVAELADCQAEHAELGPIGDRLASAGQGVVSSVLVIQQHDAAHIEETPVSKISHAHYEKFTVDESSSSVTEISKVLV 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1420482 1424151 - Conep10aG0030800.1 Cone10ag0300 446098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0300 839 FunFam Cation/H(+) antiporter 15 28 438 - -
Cone10ag0300 839 PANTHER CATION/H + ANTIPORTER 9 808 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cone10ag0300 839 Pfam Sodium/hydrogen exchanger family 41 427 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone10ag0300 839 Gene3D - 523 776 - -
Cone10ag0300 839 Gene3D - 28 436 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0300 Cone-Chr10:1420482 Cone14ag0671 Cone-Chr14:3458926 8.48E-259 dispersed
Cone10ag0299 Cone-Chr10:1414874 Cone10ag0300 Cone-Chr10:1420482 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0300 K26731 - cit:102630665 1266.14