Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0328 ATGTTCTTCAAGATCGTTGTTTTTATTGTAAGCTTAGCAGTCGCCGGAGAAGCTTTCAGTTTTAGCTATAATGGCTTCCGATCCGCCAATCTAACGCTCGACGGTATAGCCGGAATAACCTCAAACGGTCTACTTAAGCTCACAAACGACACAAGGCAACGCACCGGCCATGCTTTCTACCCCAACCCTATAACCTTCATCAACTCATCCGACAGCAGCTCAGCTCTCTCCTTCTCTGTCACTTTCGTGTTCGCTATAATCTCTGAATATGCAACTCTAAGTGGCCATGGGATCGCTTTCGTCGTTTCTCCAACTAGAGGTCTTCCCGGAGCTCTTCCTAGTCAGTATCTCGGCCTCTTTAACGAATACAACGATAGGAATTTGACCAATCACGTCTTCGCCGTTGAGCTGGATACAATCCAGAACAAAGAGTTTGCCGACATCGACGATAACCATGTCGGAATTGATATCAATGGATTGACCTCCAAAAAAGCAGATCACGCTAAATATTACAATAGCAAAACTGGTGGGTTTACGAATTTGAGCTTAATTAGTGGAAAACCCATGCAAGTATGGATTGAATATGATGGTTTGGATAAGAAGATTGATGTCACGCTGGCCCCAATCAATATAATAGGTAAACCCACTACTCCACTTCTGTCTTATCGTACTGATCTTTCCTCTGTCATGAAAGAGACCATGTTTGTGGGTTTCTCATCGTCAACTGGGTCTTTCTTAACTTCTCATGTTATTCTGGGTTGGAGCTTTGCCACAAATGGTCAAGCTCCAAGTCTCGACCTTTCTCAACTTCCCAAATTGCCTCGAGTTGGACCGAAGAAGACGCCAAAGATTTTCACAATTGGGTTGCATTTGATTGGTGTTTGTATTGTTTCCATTGCGATCTGGGGTGTTGTTTATTGCATAAGTAGGAAGATAAAATTTGCTGAACTTGTTGAAGATTGGGAGAGTGAATACGGGCCGACCAGATTCAAATACAAAGATCTATACATCGCGACGAAGGGATTCAAGGACAAAGAACTATTAGGTTCTGGAGGATTTGGTAAAGTGTATAGAGGAATTCTTCCTACTTCAAAGCTTGAGGTTGCAGTGAAGAAGGTCTCTCATGAATCGAGACAGGGCATGAAGGAATTTGTGGCGGAGATTGTAAGTATCGGTAGGCTGCGCCACCGTAATCTTGTCCCCTTTTTAGGCTATTGCCGGCGAAAAGGGGAGCTGATTTTGGTCTATGATTATATGCCGAATGGAAGCCTTGATAAGTACATTCACAATCAACCAGAAGTTACTCTGAACTGGATGCAGAGATTTCGAGTCATCAAAGGGGTGGCTTCAGGACTGTTTTATTTACATGAAGAATGGGAGCAGGTAGTGATTCATAGAGATGTGAAAGCTAGTAATGTTTTACTAGACGGTGACTTGAATGGAAGATTAGGTGATTTTGGATTAGCAAGATTGTATGATCATGGCACTGATCCTCAAACAACTCATGTGGTGGGGACTCTTGGCTATCTTGCCCCAGAACATACTCGAACCGGAAAAGCCACGCCTTCTATGGGCGTGTTTGCTTTTGGTGCATTTCTGCTTGAAGTTGCTTGTGGGCGAAGGCCGATAGAACCGAGGAGGCAAACGGAGGATATGATTTTGGTGGATTGGGTGTTTTCATGTTGGAATAAAGGTAACATTCTTGACACCGTGGACCCAAACTTGGGTTCCGACTATGTGAAGGAGGAAGTGGAGTTGGTGTTGAAACTAGGCTTGCTTTGCTCGCATTCGCAACCCATGGCTCGGCCTAGTATGCGGCAGGTCGTGCGGTACTTGGAGGGAGAAGTGCTTCTGCCTGATACATCGATTCTTGGTCTTAATTCGGCTGGCTTAACTTTTTATAGTCGCGAAGGATTTGATGATTTTGTTATGTCTTATCCTTCTTCCACGGATAAGGCTTTTACGAGTTCATCTTTTGTTGCGGAGTCACTTCTGTCCGGAGGCCGGTGA 2010 44.38 MFFKIVVFIVSLAVAGEAFSFSYNGFRSANLTLDGIAGITSNGLLKLTNDTRQRTGHAFYPNPITFINSSDSSSALSFSVTFVFAIISEYATLSGHGIAFVVSPTRGLPGALPSQYLGLFNEYNDRNLTNHVFAVELDTIQNKEFADIDDNHVGIDINGLTSKKADHAKYYNSKTGGFTNLSLISGKPMQVWIEYDGLDKKIDVTLAPINIIGKPTTPLLSYRTDLSSVMKETMFVGFSSSTGSFLTSHVILGWSFATNGQAPSLDLSQLPKLPRVGPKKTPKIFTIGLHLIGVCIVSIAIWGVVYCISRKIKFAELVEDWESEYGPTRFKYKDLYIATKGFKDKELLGSGGFGKVYRGILPTSKLEVAVKKVSHESRQGMKEFVAEIVSIGRLRHRNLVPFLGYCRRKGELILVYDYMPNGSLDKYIHNQPEVTLNWMQRFRVIKGVASGLFYLHEEWEQVVIHRDVKASNVLLDGDLNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATPSMGVFAFGAFLLEVACGRRPIEPRRQTEDMILVDWVFSCWNKGNILDTVDPNLGSDYVKEEVELVLKLGLLCSHSQPMARPSMRQVVRYLEGEVLLPDTSILGLNSAGLTFYSREGFDDFVMSYPSSTDKAFTSSSFVAESLLSGGR 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1548966 1550975 - Conep10aG0033600.1 Cone10ag0328 446126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0328 669 CDD lectin_legume_LecRK_Arcelin_ConA 19 260 IPR001220 GO:0030246(InterPro)
Cone10ag0328 669 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Cone10ag0328 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 279 IPR013320 -
Cone10ag0328 669 FunFam L-type lectin-domain containing receptor kinase S.4 419 624 - -
Cone10ag0328 669 PANTHER - 23 625 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cone10ag0328 669 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0328 669 SMART serkin_6 342 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0328 669 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524(InterPro)
Cone10ag0328 669 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0328 669 Gene3D - 17 269 - -
Cone10ag0328 669 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Cone10ag0328 669 FunFam L-type lectin-domain containing receptor kinase V.9 18 263 - -
Cone10ag0328 669 Gene3D Phosphorylase Kinase; domain 1 328 418 - -
Cone10ag0328 669 SUPERFAMILY Protein kinase-like (PK-like) 323 619 IPR011009 -
Cone10ag0328 669 Pfam Legume lectin domain 20 271 IPR001220 GO:0030246(InterPro)
Cone10ag0328 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0328 669 CDD STKc_IRAK 348 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0326 Cone-Chr10:1536026 Cone10ag0328 Cone-Chr10:1548966 0 dispersed
Cone10ag0328 Cone-Chr10:1548966 Cone10ag0330 Cone-Chr10:1561905 0 dispersed
Cone10ag0327 Cone-Chr10:1542496 Cone10ag0328 Cone-Chr10:1548966 0 tandem
Cone10ag0328 Cone-Chr10:1548966 Cone10ag0329 Cone-Chr10:1555436 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81805 PF01679 Pmp3 1.90E-07 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0328 - - - 0.0