Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0383 ATGGCTGCCGCCGCCACCACCACCGCTGCTACATCCTCTTTCATTGGAACTCGTCTTCCCGACGTGCGCTCAAGCCCGGGCAGAATCCAAGCCCGATTCGGTTTCGGACGCAAGAAAGGCCCAGCTCCCAAGAAAGCATCAAAGCCCACTACAGACCGCCCTCTCTGGTACCCAGGAGCTAAAGCACCCGAATATCTCGACGGAAGCTTGGTAGGCGATTACGGGTTCGACCCATTTGGTTTGGGTAAGCCCGCAGAGTACCTTCAGTTCGACTTGGACTCTTTGGACCAGAACTTGGCGAAAAACTTGGCCGGTGATGTGATTGGAACCCGGTTCGAGAGCGCGGAAGTAAATTCTACTCCCTTCCAGCCTTACGCTGAGGTTTTTGGGCTGCAGAGGTTCCGTGAATGCGAGCTCATCCATGGAAGATGGGCCATGCTTGCCACTCTTGGGGCCCTCACCGTCGAATGGCTCACCGGCATCACCTGGCAAGATGCTGGAAAGGTAGAGCTAGTGGAAGGGTCATCATACCTTGGTCAACCTCTACCATTCTCTATTACGACATTGATCTGGATCGAGGTCTTAGTGATTGGATACATTGAGTTTCAGAGAAACGCAGAGTTGGACCCAGAGAAGAGGTTGTACCCTGGCGGGAGCTTCTTCGACCCGTTGGGTTTGGCTGCGGATCCAGAGAAGAAGGCGACCCTCCAATTGGCGGAAATCAAGCACGCCCGTCTTGCTATGGTGGCTTTCTTGGGCTTTGCTGTTCAAGCTGCCGTCACTGGCAAAGGCCCACTTAACAACTGGGCGACCCATTTGAGCGATCCACTCCACACCACCATCATTGACACATTTACTTCATCCTCTTAA 870 53.91 MAAAATTTAATSSFIGTRLPDVRSSPGRIQARFGFGRKKGPAPKKASKPTTDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFESAEVNSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFTSSS 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1812105 1813645 - Conep10aG0039500.1 Cone10ag0383 446181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0383 289 MobiDBLite consensus disorder prediction 1 53 - -
Cone10ag0383 289 FunFam Chlorophyll a-b binding protein, chloroplastic 103 287 - -
Cone10ag0383 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 283 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cone10ag0383 289 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Cone10ag0383 289 SUPERFAMILY Chlorophyll a-b binding protein 46 287 - -
Cone10ag0383 289 Gene3D Chlorophyll a/b binding protein domain 56 289 - -
Cone10ag0383 289 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0383 Cone-Chr10:1812105 Cone1ag1346 Cone-Chr1:56525339 2.18E-41 dispersed
Cone1ag1220 Cone-Chr1:55986365 Cone10ag0383 Cone-Chr10:1812105 9.77E-142 wgd
Cone10ag0383 Cone-Chr10:1812105 Cone3ag0419 Cone-Chr3:2060046 2.63E-203 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0383 K08915 - rcu:8267514 507.294