Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0440 ATGAGTTGCAGCGAGAAGAACAGAGGAACTGAAGAGAGGGAACAGGGGCAGCTCGTTCTAAGCAGATCTATCAAGGTTAAGCCGGAATCAGCCACGGATAATGGGTCTATTACTTCACAGCAGACCATCGATGAGAATCGGCTGGTTGACCCTAAGTTGTTGTTTATTGGATCAAAAATTGGCGAGTATCGGGATCGTATTGTTGCTATCAAAGTTCTTCATCGTGGGAGTACTACAGGAAAACGAGCTGCACTTGAGAATCGTTTTGCCCAGGAAGTTAACATGATGTGCCAAGTTAAACATGAGAATCTTGTCACGTTTATTGGAGCACGTAAAGATCCTTTAATGGTGATAGTGACAGAGCTATTGCCTGGGATGTCCCTTCGGAAGTATCTATTTAGTGTACGCCCAAATCAATTAGAACTTCATGTGACTATAAACTTTGCGTTGGATATCGCTCGTGCTATGGAATGTCTACATGCCAATGGGATCATACACAGGGATCTCAAACCTGGTACCATATGGCTGACTTTTGGTCTTGCAAGAGAAGAATCCGTGACCGAGATGATGACAGCTGAAACCGGGACTTATTGTTGGATGGCTCTTGAGTTGTACAGCACTGTGACATTGCGTCAGGGGAGAAGAAGCGTTGATGTGTACAGCTTTGGAATTGTCTTATGGGAGCTCTTGACTAACCGCATGCCCTTTGAGGGCATGTCCAATTTGCAAGGCGCATATTCTGCTGCTTTTAAGCAAGAAAGGCCCAATCTACCCGAGGACATATCTCCCGATTTGGCTTTCCTAATTCAGTCTTGTTGGGTTGAGGATCCAAACATGAGGCTGAGTTTCAGTCAGATTATCCGGATACTCAATGCATTTCTGTTTACACTACCCCCAGCTTCATCGTCTTTGCCGGGAAGTAATGTGGCTGAGGTGGCGGCGACTAGTAACAGTACCATCACTGTGCTTTCTGGTCGTGGAGGAGGGAAGTTTGGTTTTCTATGTCAACTGTTTGCTGCCAAGAGGACCAAGAACTGA 1038 45.66 MSCSEKNRGTEEREQGQLVLSRSIKVKPESATDNGSITSQQTIDENRLVDPKLLFIGSKIGEYRDRIVAIKVLHRGSTTGKRAALENRFAQEVNMMCQVKHENLVTFIGARKDPLMVIVTELLPGMSLRKYLFSVRPNQLELHVTINFALDIARAMECLHANGIIHRDLKPGTIWLTFGLAREESVTEMMTAETGTYCWMALELYSTVTLRQGRRSVDVYSFGIVLWELLTNRMPFEGMSNLQGAYSAAFKQERPNLPEDISPDLAFLIQSCWVEDPNMRLSFSQIIRILNAFLFTLPPASSSLPGSNVAEVAATSNSTITVLSGRGGGKFGFLCQLFAAKRTKN 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2045302 2047390 + Conep10aG0045500.1 Cone10ag0440 446238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0440 345 PANTHER SERINE-THREONINE PROTEIN KINASE 61 291 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone10ag0440 345 Gene3D Transferase(Phosphotransferase) domain 1 127 301 - -
Cone10ag0440 345 CDD STKc_MAP3K-like 61 290 - -
Cone10ag0440 345 Pfam Protein tyrosine and serine/threonine kinase 64 290 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0440 345 Gene3D Phosphorylase Kinase; domain 1 59 123 - -
Cone10ag0440 345 SUPERFAMILY Protein kinase-like (PK-like) 64 305 IPR011009 -
Cone10ag0440 345 ProSiteProfiles Protein kinase domain profile. 26 294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0440 Cone-Chr10:2045302 Cone18ag1380 Cone-Chr18:9463826 8.20E-102 dispersed
Cone10ag0440 Cone-Chr10:2045302 Cone13ag1446 Cone-Chr13:10362427 2.23E-78 wgd
Cone10ag0440 Cone-Chr10:2045302 Cone19ag1445 Cone-Chr19:9410125 3.05E-169 wgd
Cone10ag0440 Cone-Chr10:2045302 Cone3ag0473 Cone-Chr3:2302328 1.37E-198 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81812 PF00254 FKBP_C 7.50E-11 CL0487 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0440 - - - 0.0