Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone10ag0447 | ATGGAGCTGCATAATATTAACAGCAATTCCGTAAGTGTTGAACTTTCTAGGGTGCAAGATAAGCTGAACAAGTCTCAGAGGATTTGCCACAAAAGTGTGCAGTTTGAGGATAACTTGGTGCATGACGAGAATCCCCGGCTGATCTATGTCAACGACCCAAAGAGAACGAATGACAAGTATGAGTTCTCAGGCAATGAGATTACAACAAGCAAGTACACATTGATCACCTTCTTGCCAAAAAATCTCTTCATTCAGTTTCACCGGGTTGCTTATCTATACTTCCTTGCTATTGCCGCTCTTAACCAGCTTCCACCTCTGGCAGTCTTCGGGAGAACGGTGTCCCTTTTTCCTCTCTTATTTGTGCTTTCTGTCACAGCTATCAAAGATGGTTATGAGGATTGGCGGAGGCATAGATCAGATCGCAAAGAAAACAATCGAGAGGCTTTTGTGTTTCAATCTGGGGAATTCCAACCTAAAAAGTGGAAGAATATTTTAGCTGGTGAGGTGGTGAAGATCTGTGCTGATGAGAGCATCCCATGCGATATGGTTTTGTTAGGGAGCAGTGATCCTAGTGGACTTGCCTATATCCAGACAATGAATTTGGATGGTGAGTCAAACTTGAAAACAAGGTTTGCTAGGCAGGAAACAGCATCAGCAGTGACTGAGGGAAGTTCAATATCAGGGCTTATAAGATGTGAGCAACCTAACAGAAATATCTATGAGTTCACAGCCAACATGGAGTTCAGAAACCATAAATTTCCCCTCAGCCAATCAAACATAGTTCTACGTGGCTGTCAGCTAAAGAACACTGAATGGATTATTGGGGTTGTCGTCTATGCAGGGCAGGAAACAAAAGCGATGTTAAATAGCGCAGCTTCACCTTCCAAGAGAAGCAAACTGGAAGGTTATATGAACAGGGAAACATTGTGGTTATCTATCTTCCTCTTTGTCATGTGTCTGGTTGTGGCTTTGGGAATGTGCTTATGGCTCGTGCGCCACAAGGACCGTCTTGATACCATGCCTTATTACAGGAAAACATATATAGCAGCATTAAAGGGTATTGGTAAAAAGTACAAGTACTATGGAATACCGATGGAAACCTTTTTCTCCTTCTTGAGCTCTGTAATTGTCTTTCAGATAATGATACCGATATCCCTTTATATTACCATGGAATTAGTTCGTCTAGGTCAGTCATATTTCATGATTGAAGACGACCATATGTATGACAGTAACTCCAACTCAAGATTCCAGTGCAGATCATTGAATATTAATGAGGACCTAGGTCAAATACGCTATGTATTTTCGGACAAAACTGGAACACTTACTGAAAACAAAATGGAATTCCAACGAGCAAGTGTATATGGGAAGAATTATGGAAGCTCCTCTGCAGTAGCTGATCCATCAGACACAGAGAATGTTCATGGAAGAAGGAGATGGAGGCTCAAGTCTAACATTCCTGTTGATCCCGAACTCCTTGAGTTGTTGCATAAGGATCTTACTGGAGATGAAAAGATATCTGTGCACGAATTTTTCCTTACTTTGGCTGCATGTAATACTGTAGTTCCCATTGTTGTTGGTGATGGACGGTGTAGTTGCACTAATAGTGAGTTACAAGAGGATGCAGCAGCGATTGACTATCAGGGTGAATCTCCTGACGAGCAAGCTCTAGTTGCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGTGCATCTGGGCATATTGAAATTGATGTCAATGGTGAGAATCTAAGGTTGGATGTTTTGGGCTTGCATGAGTTTGATAGTGTGCGCAAAAGAATGTCGGTTGTCATCAGATTTCCTGACAATACTGTTAAGGTTCTTGTGAAAGGTGCCGATACATCTATGTTCAGTACATTAGTATATGATTCTGAGAGGAATCATCACACAAAACTTGCAACTCAGGGTCATTTGACTGAATATTCATCGCAAGGTTTACGTACACTCGTGGTCGCTTCTAGAGACCTTTCTGAGGAAGAACTTGATGAATGGAAGAGTCAGTATGAAGATGCAAGCACTTCGTTGACTGATAGAGCCATAAAACTAAGACAAACAGCTGCTATAATTGAATGCAACTTAAAGCTTCTTGGCGCGACCGCTATTGAGGACAAGCTACAGGATGGTGTGCCAGAAGCCATTGAGTCCCTTCGTCAAGCAGGAATAAAGGTGTGGGTTCTTACTGGAGATAAACAGGAGACTGCTATATCCATTGGCCTCTCTTGCAAACTCCTGACAGTAGATATGGAGCAGATTATTATCAATGGGAATTCGGAGAATGATTGTAGGAGACTTTTGTCTGAAGCAAAGATCAAGTGTGGTTTTAAATCAGTGAAGAGTAAAAGTCCCGAGTTGGGGGTGGAACAGGATTTGGAAAATGACTACCTTGAGATGTCAGGTGTTACAGAGTCGCCTGGGCTGCCAGAATGGCATGCAGGGAGGGAAGAAAAAATGACAATCGTACCACTAGCACTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAGAAAGATCTGGAGTCAGAGCTTTTTGATGTTGCAACCTCATGTAAGGTTGTAATATGCTGTCGTGTTGCACCCTTACAAAAAGCTGGAATTGTTGATCTAATCAAGAGCCATACTGATGATATGACACTCGCAATAGGAGATGGGGCCAATGATGTATCAATGATACAAATGGCCGATGTTGGTGTTGGCATATGCGGTCAGGAAGGGCGGCAGGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGTTTTCTGAAAAGATTACTTCTAGTACATGGACACTGGAATTATCAACGTGTTGGCTACATGGTTCTTTACAACTTCTACCGGAATGCTGTTTTTGTGTTGATGCTTTTCTGGTTTATCCTTTGCACAGCTTTCTCAACAACTTCTGCATTAACAGATTGGAGTAGTGTATTATATTCTGTTGTCTATACATCTGTCCCTACTATTGTGGTTGGTATTCTGGACAAAGACTTGAGCCATAAGACCCTATTAAAATATCCGAAGCTCTATGGTGCTGGCTATAGACACGAGGCTTACAATTTTCATCTGTTTTCAATTACAATGATTGACACACTGTGGCAGAGTCTCGTTCTCTTCTATGTACCACTGTTCACCTACAAAGAGAGCACAATGGATATTTGGAGCATGGGAAGTCTGTGGACATTAGCAGTTGTTGTCCTCGTGAATGTACACTTGGCAATGGATGTAAACCGTTGGATTTTTATAACTCATGTTGCAGTGTGGGGATCTATAATTATTACATATACTTGCATGGTGATTCTGGATTTCATACCATCATTTCCCAATTACTGGACAATTTTCCAGTTGGCGAAATCTCCTAGCTATTGGCTCGACATTTTGCTTATAACAATTGTAGCATTGCTTCCTCGTTTTCTTTTCAAAGTTGTACATCAAAGCTTTTGGCCTTCAGATATTCAGATAGCAAGAGAAGCTGAGGTATTGAGAAAAGAGCGATATCATCTGTGGTCAAAGCAAGATCAGGATTCCAGTTAG | 3552 | 41.58 | MELHNINSNSVSVELSRVQDKLNKSQRICHKSVQFEDNLVHDENPRLIYVNDPKRTNDKYEFSGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLSVTAIKDGYEDWRRHRSDRKENNREAFVFQSGEFQPKKWKNILAGEVVKICADESIPCDMVLLGSSDPSGLAYIQTMNLDGESNLKTRFARQETASAVTEGSSISGLIRCEQPNRNIYEFTANMEFRNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAASPSKRSKLEGYMNRETLWLSIFLFVMCLVVALGMCLWLVRHKDRLDTMPYYRKTYIAALKGIGKKYKYYGIPMETFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDDHMYDSNSNSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVYGKNYGSSSAVADPSDTENVHGRRRWRLKSNIPVDPELLELLHKDLTGDEKISVHEFFLTLAACNTVVPIVVGDGRCSCTNSELQEDAAAIDYQGESPDEQALVAAASAYGYTLFERASGHIEIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSTLVYDSERNHHTKLATQGHLTEYSSQGLRTLVVASRDLSEEELDEWKSQYEDASTSLTDRAIKLRQTAAIIECNLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTVDMEQIIINGNSENDCRRLLSEAKIKCGFKSVKSKSPELGVEQDLENDYLEMSGVTESPGLPEWHAGREEKMTIVPLALIIDGNSLVYILEKDLESELFDVATSCKVVICCRVAPLQKAGIVDLIKSHTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWFILCTAFSTTSALTDWSSVLYSVVYTSVPTIVVGILDKDLSHKTLLKYPKLYGAGYRHEAYNFHLFSITMIDTLWQSLVLFYVPLFTYKESTMDIWSMGSLWTLAVVVLVNVHLAMDVNRWIFITHVAVWGSIIITYTCMVILDFIPSFPNYWTIFQLAKSPSYWLDILLITIVALLPRFLFKVVHQSFWPSDIQIAREAEVLRKERYHLWSKQDQDSS | 1183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 2076438 | 2084030 | - | Conep10aG0046200.1 | Cone10ag0447 | 446245 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone10ag0447 | 1183 | Coils | Coil | 661 | 681 | - | - | |
| Cone10ag0447 | 1183 | Gene3D | - | 123 | 289 | - | - | |
| Cone10ag0447 | 1183 | Pfam | E1-E2 ATPase | 146 | 389 | - | - | |
| Cone10ag0447 | 1183 | Pfam | Cation transport ATPase (P-type) | 532 | 625 | - | - | |
| Cone10ag0447 | 1183 | Pfam | Phospholipid-translocating ATPase N-terminal | 48 | 113 | IPR032631 | - | |
| Cone10ag0447 | 1183 | FunFam | Phospholipid-transporting ATPase | 702 | 928 | - | - | |
| Cone10ag0447 | 1183 | SFLD | p-type atpase | 418 | 939 | IPR044492 | - | |
| Cone10ag0447 | 1183 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 436 | 442 | IPR018303 | - | |
| Cone10ag0447 | 1183 | Pfam | haloacid dehalogenase-like hydrolase | 669 | 744 | - | - | |
| Cone10ag0447 | 1183 | SUPERFAMILY | HAD-like | 429 | 934 | IPR036412 | - | |
| Cone10ag0447 | 1183 | SUPERFAMILY | Calcium ATPase, transduction domain A | 145 | 286 | IPR008250 | - | |
| Cone10ag0447 | 1183 | NCBIfam | HAD-IC family P-type ATPase | 367 | 459 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0447 | 1183 | NCBIfam | HAD-IC family P-type ATPase | 858 | 974 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0447 | 1183 | Gene3D | - | 700 | 928 | IPR023214 | - | |
| Cone10ag0447 | 1183 | CDD | P-type_ATPase_APLT_Dnf-like | 64 | 1048 | - | - | |
| Cone10ag0447 | 1183 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 916 | 1156 | IPR032630 | - | |
| Cone10ag0447 | 1183 | PRINTS | P-type cation-transporting ATPase superfamily signature | 888 | 907 | - | - | |
| Cone10ag0447 | 1183 | PRINTS | P-type cation-transporting ATPase superfamily signature | 434 | 448 | - | - | |
| Cone10ag0447 | 1183 | SFLD | C1.7: P-type atpase like | 418 | 939 | - | - | |
| Cone10ag0447 | 1183 | NCBIfam | phospholipid-translocating P-type ATPase | 62 | 1163 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
| Cone10ag0447 | 1183 | Gene3D | - | 536 | 680 | IPR023299 | GO:0000166(InterPro) | |
| Cone10ag0447 | 1183 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 440 | 716 | IPR023299 | GO:0000166(InterPro) | |
| Cone10ag0447 | 1183 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 62 | 1155 | IPR023298 | - | |
| Cone10ag0447 | 1183 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 40 | 1165 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0447 | Cone-Chr10:2076438 | Cone18ag0600 | Cone-Chr18:3025610 | 0 | dispersed | |
| Cone10ag0447 | Cone-Chr10:2076438 | Cone3ag0482 | Cone-Chr3:2347796 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone10ag0447 | K14802 | - | mdm:103433765 | 1882.84 |