Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0450 ATGAAGAACACCCACAAGCATCGTCTTTCTTCTGCCTCCTCCATCTTCATTTACCTGGCCTTCACAGCCCGTCTGATTTTAGCAGCAAATTATACTCCGGCCGAAGTCATCCTCCTCAATTGTGGAGGTCCTTCTCAAAGTAGCGATTCTGATGGTCGAAAATGGACCTCCGATGTCGGTTCCCGGTTTATCGTGGCAGCTGGGAACTCTGTCGCCTCGGATGCTGCTACTCAGGATCCTTCAGTGTCCGTCGTCCCTTACATGACCGCCCGTGTTTTCCGGTCAAATTTCACCTACAGTTTTCCCGTCGTAGCGGGCCATAAGTTTGTCCGCCTCTACTTCTATCCTGCTACCTACGGAGGCCTTAACGCTTCTAACGCCCTCTTCTCTGTCACCGCCCAATCTTTTACTCTCCTTAAGAACTTCAGTGTTCTTCAGACCACTCAAGCTTTGAATTATGACTTTATAAACAAGGAATATGTAGTCAATGTTGAAGGAGATACATTGAACATAACTTTCAATCCATCCCCCACTACTTCCAATTCATTCGCTTTTGTGAATGGGATTGAAGTCGTCTCGATGCCTGATATCTATAGTGAGACTGATGGAACTACCATGATTGTTGGTCAATCTACTTCATTCTCTGTCGACAACAGCACTGCCCTTGAGAATGTTTACCGCTTGAACGTAGGAGGTAATTATATTTCGCCCACATCTGATACAGGTCTCTTCAGGTCATGGAGTGACGATTCTGCTTACATCTTTGGGGCTATGCTTGGGATCACCATGGCTACAGATCCAAACATCACAATCGAGTATCCATCTAATATTCCCAGTTATGTTGCACCTGTTGATGTCTATTCCACTGCTAGAGCAATGGGACCCGATAGTAATGTCAACCTTAATTCCAATTTGACTTGGATCTTTTCAGTTGATTCCGGATTCTTTTACCTGGTTCGACTCCATTTTTGTGAGGTTTTCGTAAACATGACCAAGATCAATCAGAGAGTATTTGATATCTTCCTCAACAATCAAACCGCCGTGCATGGGGCTGATGTTATTGGCTGGGCAGGAAAGAGTGAAGTTCCTGTTTTCAAGGATTTTGTGGTCTTTGTTCCGAGTGGGAGCCCACAGCAGGATCTGTGGCTCACGCTTCATCCAGACACAGAGACAAAGCCCATGTATTACGATGCCATTTTGAATGGAGTGGAAATATTCAAAATCAATGACACGAAGGGTAATCTTGGAGGCCCGAATCCTATTCCTGCACCTAAACAGGATGTGATTAAGCCAATATCACCACCATCAGCTCGTGGTAAATCAAAGAATCAATCAGCAGTTATTGGAGGGGGTATTGGTGGTGGAGTTGTGTTGGCCCTTTTGATTGGCTTCTTTGTCGTTGCTCCTGCTTGTCGTCGTGGAAAGGGGAAGGAGTCAAGTGGCAGTGAAGGACCTTCCGGATGGCTTCCTCTTTCTCTATATGGGAATTCTCACTCTGCTGGTTCCGCCAAGACTAACACAACTGGAAGTTATGCTTCCTCCATACCTTCCAACCTCTGCCGCCACTTTTCATTTGCCGAGATCAGGGCTGCCACCAAGAACTTTAATGAGTCTTTGGTTCTTGGGGTGGGAGGTTTTGGCAAGGTATACAAGGGTGTGATCAATGGTGGAAGTGGAACAATGACAGTTGCAATCAAGCGTGGGAACCCACTCTCAGAGCAAGGGGTGCATGAATTTCAAACTGAAATCGAAATGCTCTCAAAACTCCGACATCGCCACCTTGTTTCTCTGATTGGCTACTGTGAAGAGAACTGTGAAATGATTCTTGTTTACGATTACATGGCTTATGGAACACTGCGAGAGCATCTATACAAGTCCCAAAAGCCCCCCTTACCTTGGAAGCAAAGGCTTGAGATATGCATTGGTGCTGCCCGTGGCCTGCACTATCTCCACACAGGTGCTAAGCACACAATCATTCACCGAGATGTTAAAACAACCAACATTCTTTTAGATGAGAAGTGGGTGGCAAAGGTCTCTGATTTTGGTCTGTCAAAGACTGGTCCTACATTGGATAATACACATGTTAGCACTGTCGTGAAGGGTAGTTTTGGCTACTTGGACCCGGAGTACTTCCGAAGGCAGCAGTTGACAGACAAGTCTGATGTCTACTCATTTGGAGTTGTTCTTTTCGAGATATTGTGTGCTCGGCCAGCTCTGAACCCAGCCCTCTCTAGAGAGCAGGTGAGCTTGGCGGAGTGGGCTGCACATTGCCAGAGGAAAGGCATGCTGGACCAGATAGTAGACCCTTATCTCAAGGGGAAGATAGCTCCCGAGTGTCTTAAGAATTTCGCTGACACAGCAATGAAGTGTGTGGCTGATCAGGGCATAGACAGGCCATCAATGGGTGATGTCCTGTGGAACCTGGAGTTTGCTTTGCAGCTGCAGGAGAGTGCAGAAGAGAGTGGCATTGTAAGCCGGTCCATTGATATCAAGGAGGACACTGAATTTGAGGTGGCTTCAAGGGGAAAGAAGGATCCGAATGCATTCGACAGCAACGTAACAGACTCGGGGAGCAGCGGAATGAGTATGAGTATCGGGGGTCGAAGCCTTGCGAGTGAAGACTCCGATGGACTCACACCAAGTACTGTCTTCTCACAGATTATGAACCCAAAAGGCCGCTGA 2682 46.98 MKNTHKHRLSSASSIFIYLAFTARLILAANYTPAEVILLNCGGPSQSSDSDGRKWTSDVGSRFIVAAGNSVASDAATQDPSVSVVPYMTARVFRSNFTYSFPVVAGHKFVRLYFYPATYGGLNASNALFSVTAQSFTLLKNFSVLQTTQALNYDFINKEYVVNVEGDTLNITFNPSPTTSNSFAFVNGIEVVSMPDIYSETDGTTMIVGQSTSFSVDNSTALENVYRLNVGGNYISPTSDTGLFRSWSDDSAYIFGAMLGITMATDPNITIEYPSNIPSYVAPVDVYSTARAMGPDSNVNLNSNLTWIFSVDSGFFYLVRLHFCEVFVNMTKINQRVFDIFLNNQTAVHGADVIGWAGKSEVPVFKDFVVFVPSGSPQQDLWLTLHPDTETKPMYYDAILNGVEIFKINDTKGNLGGPNPIPAPKQDVIKPISPPSARGKSKNQSAVIGGGIGGGVVLALLIGFFVVAPACRRGKGKESSGSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSIPSNLCRHFSFAEIRAATKNFNESLVLGVGGFGKVYKGVINGGSGTMTVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKSQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPALSREQVSLAEWAAHCQRKGMLDQIVDPYLKGKIAPECLKNFADTAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGIVSRSIDIKEDTEFEVASRGKKDPNAFDSNVTDSGSSGMSMSIGGRSLASEDSDGLTPSTVFSQIMNPKGR 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2090358 2093039 + Conep10aG0046500.1 Cone10ag0450 446248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0450 893 FunFam FERONIA receptor-like kinase 36 195 - -
Cone10ag0450 893 CDD STKc_IRAK 541 809 - -
Cone10ag0450 893 MobiDBLite consensus disorder prediction 847 893 - -
Cone10ag0450 893 FunFam Receptor-like protein kinase FERONIA 614 824 - -
Cone10ag0450 893 PANTHER OS03G0124300 PROTEIN-RELATED 12 472 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cone10ag0450 893 SUPERFAMILY Protein kinase-like (PK-like) 509 810 IPR011009 -
Cone10ag0450 893 MobiDBLite consensus disorder prediction 839 893 - -
Cone10ag0450 893 Gene3D Transferase(Phosphotransferase) domain 1 614 832 - -
Cone10ag0450 893 FunFam FERONIA receptor-like kinase 220 409 - -
Cone10ag0450 893 MobiDBLite consensus disorder prediction 416 444 - -
Cone10ag0450 893 ProSitePatterns Protein kinases ATP-binding region signature. 541 566 IPR017441 GO:0005524(InterPro)
Cone10ag0450 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0450 893 Gene3D Phosphorylase Kinase; domain 1 497 613 - -
Cone10ag0450 893 SMART serkin_6 535 811 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0450 893 Pfam Protein tyrosine and serine/threonine kinase 540 805 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0450 893 ProSiteProfiles Protein kinase domain profile. 535 811 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0450 893 Gene3D - 221 409 - -
Cone10ag0450 893 Gene3D - 34 195 - -
Cone10ag0450 893 Pfam Malectin-like domain 39 408 IPR024788 -
Cone10ag0450 893 FunFam receptor-like protein kinase FERONIA 497 613 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0450 Cone-Chr10:2090358 Cone3ag0691 Cone-Chr3:3533339 9.13E-305 dispersed
Cone10ag0450 Cone-Chr10:2090358 Cone10ag0454 Cone-Chr10:2116669 4.85E-65 proximal
Cone10ag0450 Cone-Chr10:2090358 Cone19ag1457 Cone-Chr19:9464268 0 wgd
Cone10ag0450 Cone-Chr10:2090358 Cone3ag0483 Cone-Chr3:2361441 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81814 PF06521 PAR1 8.50E-76 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0450 - - - 0.0