Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0463 ATGCTTTATACCCACGTTATTGCCTTTACCTTGTACGAACTGGAGACTATCACCAAGAGCTTCCGCTCCGACTATATTCTCGGCGAGGGAGGGTTCGGAACCGTTTACAAGGGTTACATTGACGAGAATGTCAGGGTTGGCCTCAAATCCCTCCCTGTGGCCGTCAAGGTTCTCAACAAGGAGGGCCTTCAGGGGCATCGAGAGTGGCTTACGGAAGTTAACTTTCTTGGGCAGCTGAGGCATTCAAATCTTGTTAAGTTGATCGGATATTGCTGCGAGGATGATCACAGGTTACTCGTCTATGAGTTCATGTTCCGAGGAAGCCTTGAAAACCACCTCTTTCGAAAGGCGTCTGTTCCATTGTCATGGGCGACAAGGATGATGATTGCCCTTGGAGCAGCCAAAGGACTTGCTTTTCTTCACAATGCAGACAGACCAGTTATATATCGAGATTTCAAGACTTCTAATATCTTATTAGACTCTGACTATACAGCCAAGCTTTCAGATTTTGGGCTTGCTAAAGCCGGACCACAAGGGGATGAAACTCACGTATCTACTCGAGTAATGGGTACCTATGGCTATGCTGCCCCTGAATATGTCATGACCGGGCACCTGACTGCAAGGAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTGGAGCTGTTGACAGGAAGGAAATCAGTTGACAAGACGAGACCCAGCAAGGAGCAGAACTTGGTGGATTGGGCCCGACCTAAGCTAAATGACAAGAGAAAGTTGTTACAGATAATTGATCCAAGGCTGGAGAATCAGTACTCGGTAAGAGCAGCACAGAAGGCCTGTAGCCTAGCCTACTATTGCCTAAGTCAGAATCCTAAAGCAAGGCCCTTAATGAGCGATGTTGTGGAAACATTGGAACCCTTGCAAAGTTGTAATGATGGTGTGAGTGAAGTAACATCAGCCGGTGGAGCTGCGTCATTTTCCACCCAAGGATACAGGATGCATAAAAGGTTTGTCAACAATGTCGGTCCAGGAGGTAACTGTCGGTCCCCCAACCCGAATTGTTCCCCAAGTGTCCCTGCAGCATGTAGGGTTAGATGA 1080 47.59 MLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHSNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKASVPLSWATRMMIALGAAKGLAFLHNADRPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQNLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCNDGVSEVTSAGGAASFSTQGYRMHKRFVNNVGPGGNCRSPNPNCSPSVPAACRVR 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2148326 2151679 - Conep10aG0047900.1 Cone10ag0463 446261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0463 359 Gene3D Transferase(Phosphotransferase) domain 1 104 314 - -
Cone10ag0463 359 PANTHER OS01G0588500 PROTEIN-RELATED 5 302 IPR050823 -
Cone10ag0463 359 Pfam Protein tyrosine and serine/threonine kinase 26 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0463 359 CDD STKc_IRAK 27 301 - -
Cone10ag0463 359 SUPERFAMILY Protein kinase-like (PK-like) 5 299 IPR011009 -
Cone10ag0463 359 ProSiteProfiles Protein kinase domain profile. 21 302 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0463 359 ProSitePatterns Protein kinases ATP-binding region signature. 27 56 IPR017441 GO:0005524(InterPro)
Cone10ag0463 359 Gene3D Phosphorylase Kinase; domain 1 3 103 - -
Cone10ag0463 359 FunFam Probable serine/threonine-protein kinase PBL8 104 316 - -
Cone10ag0463 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0463 359 FunFam Serine/threonine-protein kinase BIK1 1 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0463 Cone-Chr10:2148326 Cone7ag0020 Cone-Chr7:94079 1.34E-154 dispersed
Cone16ag0247 Cone-Chr16:2703139 Cone10ag0463 Cone-Chr10:2148326 6.55E-57 transposed
Cone2ag0654 Cone-Chr2:31490112 Cone10ag0463 Cone-Chr10:2148326 1.73E-153 transposed
Cone4ag0867 Cone-Chr4:6004685 Cone10ag0463 Cone-Chr10:2148326 2.78E-142 transposed
Cone10ag0463 Cone-Chr10:2148326 Cone3ag0495 Cone-Chr3:2427484 3.97E-245 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81817 PF03255 ACCA 4.70E-48 CL0127 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0463 - - - 0.0