Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0468 ATGGCTTCAAGACCCATTGTTCCATTACAAGCCAGAGGCGAGGCAGCAATAGGTGGGGGTAATATCGCCAAACCCCAACAGAAGAAACCCATTCAACCAGAAGGGAGAAACCGAAGAGCGCTAGGCGATATAGGAAATGTCGTTCCTGCCCGAGGAGGGATCATGGACCCCACAAAGGCTAACCGTCCGATCACCAGAAGCTTCTGTGCACAACTACTTGCAAATGCCCAAGCCGCCGCCGTTGCTGAAAACAACAAGAAACAAGTCCCCGTCAATGTAGATGGTGCTGCCGGGCCTGGTAAAAAAGCAGCCCCCCCTAAGATTGCTCAAAAGAAAGTCATTATCAAACCGAAATCCGAAGAAGTGATCGTGGTAAGCCCCGATTCAAAGGAAGTTGCAAAAGAGAAGAAATGTGAGGACAAGAAAAAGGAAGGAAAAGAAGGAACTTCCAAGAAGAAGAAACCGGGTCATACTCTTACCTCTGTTCTCACCGCTAGAAGCAAGGCTGCTTGTGGTCTAACTAACAGACCAAAAGACAAGGTTTTCGATATTGATTCAGCCGATTTGGGCAATGAACTGGCTGCAGTTGAATACATAGAGGACATGTACAAGTTCTATAAGGAAGCTGAGCATGAGAGCAGACCACAAGACTACATCGATTCACAACCCGAGCTGAACGTCCAGATGAGGGCAATCCTAGTAGATTGGCTAGTAGACGTGCACAGAAGATTTGAGCTAGCTCCAGAAACATTCTACCTGACCATAAACATCATAGACCGCTTCCTGTCGGTCAAAACTGTGCCTAGACGGGAACTGCAGTTAGTCGGGATCAGCTCCATGCTCATGGCCTCGAAATATGAAGAAATTTGGGCCCCTGAAGTCAATGATTTTGTCTGTCTGTCTGACCGAGCTTACACTCATGAACAGATCCTTGTCATGGAGAAAACCATCTTAGGCAAGCTTGAATGGACCTTAACTGTCCCCACTCCCTATGTCTTCCTTGTTCGGTTCATAAAGGGGTCAAATTACAATAATGACCAGGAAGTTGATGAAAATCTAGTGTTTTATTTGGGGGAACTAGGTATGATGCATTATAGTGCCGTAATTATGTATGGCCCCTCGATGATAGCTGCAGCGGCTGTATATGCGGCTAGGAGCACTTTGATGAGGAGTCCAGTTTGGAACGAGACCCTTAGGTTTCATACGGGTTTTACAGAATCGGACGTGATCCAATGTGCCAAGCTTTTGGTGAGCTTCCATGCAACGGCAGAGAAGAGCAAGCTTCAAGTAGTGTATAGGAAGTACTCCAGCTCCGAAAGAGGTGCTGTTGCTCTGCTTCCTCCGGCCAAGGCTCTCTTGCCCGGTGGCGCTGCTGCTTTGTGA 1383 47.58 MASRPIVPLQARGEAAIGGGNIAKPQQKKPIQPEGRNRRALGDIGNVVPARGGIMDPTKANRPITRSFCAQLLANAQAAAVAENNKKQVPVNVDGAAGPGKKAAPPKIAQKKVIIKPKSEEVIVVSPDSKEVAKEKKCEDKKKEGKEGTSKKKKPGHTLTSVLTARSKAACGLTNRPKDKVFDIDSADLGNELAAVEYIEDMYKFYKEAEHESRPQDYIDSQPELNVQMRAILVDWLVDVHRRFELAPETFYLTINIIDRFLSVKTVPRRELQLVGISSMLMASKYEEIWAPEVNDFVCLSDRAYTHEQILVMEKTILGKLEWTLTVPTPYVFLVRFIKGSNYNNDQEVDENLVFYLGELGMMHYSAVIMYGPSMIAAAAVYAARSTLMRSPVWNETLRFHTGFTESDVIQCAKLLVSFHATAEKSKLQVVYRKYSSSERGAVALLPPAKALLPGGAAAL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2174874 2176670 + Conep10aG0048400.1 Cone10ag0468 446266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0468 460 SMART Cyclin_C_2 328 449 IPR004367 -
Cone10ag0468 460 CDD CYCLIN_AtCycB-like_rpt1 178 323 - -
Cone10ag0468 460 PANTHER CYCLINS 180 436 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cone10ag0468 460 Gene3D - 201 444 - -
Cone10ag0468 460 MobiDBLite consensus disorder prediction 129 158 - -
Cone10ag0468 460 SUPERFAMILY Cyclin-like 190 325 IPR036915 -
Cone10ag0468 460 MobiDBLite consensus disorder prediction 1 46 - -
Cone10ag0468 460 SMART cyclin_7 332 418 IPR013763 -
Cone10ag0468 460 SMART cyclin_7 235 319 IPR013763 -
Cone10ag0468 460 Gene3D - 215 326 - -
Cone10ag0468 460 Pfam Cyclin, N-terminal domain 201 325 IPR006671 -
Cone10ag0468 460 FunFam G2/mitotic-specific cyclin 214 326 - -
Cone10ag0468 460 SUPERFAMILY Cyclin-like 327 450 IPR036915 -
Cone10ag0468 460 PIRSF Cyclin_A_B_D_E 1 459 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cone10ag0468 460 ProSitePatterns Cyclins signature. 230 261 IPR048258 -
Cone10ag0468 460 Pfam Cyclin, C-terminal domain 328 448 IPR004367 -
Cone10ag0468 460 MobiDBLite consensus disorder prediction 129 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0468 Cone-Chr10:2174874 Cone7ag1934 Cone-Chr7:12340108 6.47E-77 dispersed
Cone5ag1418 Cone-Chr5:8903977 Cone10ag0468 Cone-Chr10:2174874 1.63E-115 transposed
Cone10ag0468 Cone-Chr10:2174874 Cone3ag0499 Cone-Chr3:2456728 1.68E-295 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0468 K21777 - csv:101217210 545.043