Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0471 | ATGAGGGAAGACGAGTCGAATTGGTTTTCAAAGTGGGAAGAAGAACTTCCTTCGCCTGAAGAACTCATGCCCATCTCTCAAACCCTGATCACACCTGATCTCGCTCTAGCTTTCGATATTCGGAATCCGAACAACTCCTCTAGCCCGCAGCACACTCCTCCTCCTCCGCCTCTTCTCCCTCCTTCTAACAGCCCTCTGCCCCCTTCACCCGCCGCCGCCTGTGGTGGCCTGGGTACCGGTCTCTCTTCCGCTGCTGCCGTCGCCACTCCAACCCAACCTAACTCCTCTGACTTCTGCGATTCTGCCGATTTGGGATCAGGCGCAGCAGGCGACGAGCCTGCTCGCACCTTAAAACGGCCCCGCCTTGTGTGGACCCCACAGCTGCACAAACGGTTTGTTGACGCCGTGGCCCACTTAGGGATCAAGAACGCTGTACCTAAGACGATAATGCAGCTCATGAGCGTAGATGGATTGACTAGGGAAAACGTAGCAAGTCATTTGCAAAAGTACAGACTTTACCTCAAGCGTATGCAAGGATTGTCATCCAGTGGAGGTGGCGGGGGAGCAGGCGGTGGTGCTGGTGGTTTAGTTTCTGGGTCCGATCCCGCAACCGACCATCTTTTTGCCAGCTCACCCGTCCCACCACATTTCTTACACCCCACCAGACCTAATTCGGACCATTACTTGCCCTTTGTTCCGGTAGCTGCTCTGCAGCAGCACCATCACCACCAGCAGATGGCGGCAGCCGTGGCAGGCCACCACCACCCTCAGATTCAGCCTCAGTATCATCCCCAGCATCATAATAGGCAAGTGGGTCATTTTGGGTCGCCCCCAAATGGTCAATTTGAGCATCCATTTTTGGCTAGGCAGTCACAGCAAGTTCATAGAATGGGGGGCCCACCTATGCATAACTCTGTTCCCAGTTATGTAGAGGATTTGGAATCGGCAAATGCTTCCGGAGGGAGAAGAGTTCTTACCTTGTTTCCAACTGGAGATGACTGA | 1002 | 54.19 | MREDESNWFSKWEEELPSPEELMPISQTLITPDLALAFDIRNPNNSSSPQHTPPPPPLLPPSNSPLPPSPAAACGGLGTGLSSAAAVATPTQPNSSDFCDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSSGGGGGAGGGAGGLVSGSDPATDHLFASSPVPPHFLHPTRPNSDHYLPFVPVAALQQHHHHQQMAAAVAGHHHPQIQPQYHPQHHNRQVGHFGSPPNGQFEHPFLARQSQQVHRMGGPPMHNSVPSYVEDLESANASGGRRVLTLFPTGDD | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2186437 | 2188555 | + | Conep10aG0048700.1 | Cone10ag0471 | 446269 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 36 | 75 | - | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 87 | 113 | - | - | |
Cone10ag0471 | 333 | FunFam | Two-component response regulator | 115 | 178 | - | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
Cone10ag0471 | 333 | Gene3D | - | 116 | 178 | - | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 48 | 68 | - | - | |
Cone10ag0471 | 333 | SUPERFAMILY | Homeodomain-like | 116 | 176 | IPR009057 | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 250 | 281 | - | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone10ag0471 | 333 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cone10ag0471 | 333 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 120 | 172 | IPR006447 | GO:0003677(InterPro) | |
Cone10ag0471 | 333 | Pfam | Myb-like DNA-binding domain | 122 | 171 | IPR001005 | - | |
Cone10ag0471 | 333 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 124 | 175 | IPR017930 | - | |
Cone10ag0471 | 333 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 4 | 295 | IPR044841 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0471 | Cone-Chr10:2186437 | Cone5ag1126 | Cone-Chr5:5011016 | 7.53E-42 | dispersed | |
Cone10ag0471 | Cone-Chr10:2186437 | Cone3ag0500 | Cone-Chr3:2465908 | 1.78E-193 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44187 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0471 | - | - | - | 0.0 |