Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0486 ATGGCGTCTTCATCTGGGATTCGTTTGCTGGTATCGGATTTCATAATCTCATACATGTGGGTATGGTCAGGCGTTTTGATCAAGATCTTTGTTTACAACTTCATAGGATTAAGCCATGGACCTAAAGGTGATGCGGTTAAAGATGCTATTTATATCCTCAACATGTTCTTCTTTGCTTTCCTGGGCAAGATCACTCATGGTGGGGCTTACAATCCTCTCACTGTTCTTTATTCCGTCATTTCTGGTGATTTCAACACCTTCCTCTTCACCATTGGAGCCAGAATCCCTGCTCAGGTAGTTGGATCTGTTATGGGGATTAGGCGCTTACTACAGACATTACCGGAATTAGGCCGGCATGGTCCGCGCTTGAATGTCCATATCTATCATGGTGCACTGATTGAAGGGGCCTTAACCTTTGCCATAGTTTTAATCTCACTTGTAGCATCTAGACAAATTCCTGGTAGTTTTTACCGGAAAACTTGGATCGCAAGTGTCCTCAAATTGACTCTTCAGGTACTTAGCTCGGATCTTACCGGAGGCTGTATCAATCCCGCCACTGTGATAGGATGGGCTTTTGCTCGAGGCGAGCATCTAACCAAGGAGCATGTGATCGTGTATTGGCTTTCTCCGGCGATAGCTACACAACTAGCTGTATGGACATTTCGGTTGATCGTCCGGCAACCTAAAGAGGAAAAGGTAGAGAAGCAAGAGTAG 714 45.24 MASSSGIRLLVSDFIISYMWVWSGVLIKIFVYNFIGLSHGPKGDAVKDAIYILNMFFFAFLGKITHGGAYNPLTVLYSVISGDFNTFLFTIGARIPAQVVGSVMGIRRLLQTLPELGRHGPRLNVHIYHGALIEGALTFAIVLISLVASRQIPGSFYRKTWIASVLKLTLQVLSSDLTGGCINPATVIGWAFARGEHLTKEHVIVYWLSPAIATQLAVWTFRLIVRQPKEEKVEKQE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2255023 2256272 - Conep10aG0050200.1 Cone10ag0486 446284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0486 237 Pfam Major intrinsic protein 4 220 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 SUPERFAMILY Aquaporin-like 7 233 IPR023271 -
Cone10ag0486 237 Gene3D Glycerol uptake facilitator protein. 1 237 IPR023271 -
Cone10ag0486 237 PRINTS Major intrinsic protein family signature 8 27 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 PRINTS Major intrinsic protein family signature 164 186 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone10ag0486 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 235 IPR044226 GO:0015267(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0486 Cone-Chr10:2255023 Cone13ag0433 Cone-Chr13:3995528 3.11E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0486 K09875 - cit:102612682 320.857