Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0494 ATGGGTTTCTTAGAGATGGTCGATCCTCAGATTCTTCTGGGCTTAGCTGTCGCTGTTGTTGCCATTGGTGTCGCTGCTGCTTTTCTCTTCTCTTCTTCTAACAAGTCCAAGACTAGAGGCTGCTTAGATCCAGAGAATTACAAGGAGTTTAAACTTGTCAAGCGCGTGCAGTTGAGCCATAATGTAGCCAAGTTCACTTTTACACTTCCAACACCCACTTCCGTTCTTGGTCTTCCCATTGGACAGCATATGAGTTGCAGGGGTAAGGATAGTTTAGGAGAAGAGGTTATTAAACCATATACTCCTACGACTTTGGACTCTGATATAGGGATTTTTGAATTAGTCATAAAGATGTATCCTCAAGGAAGGATGTCACATCATTTTAGAGAGTTGCATGTTGGGGATTATCTTGCTGTGAAGGGGCCTAAGGGGCGTTTCAAGTATCAAATTGGTCAAGTTAGGGCATTTGGGATGCTTGCTGGAGGCTCTGGGATTACTCCTATGTTTCAAGTTGCTCGAGCCATATTGGAAAACCCAATCGACAAAACAAAGGTGCACCTTATTTATGCTAATGTTGCCTATGAAGACATCCTCTTAAAGGAGGAGTTAGACTCTCTCGCCACGAAATATGCAGATCGCTTCAAGATCTACTATGTCTTGAACAATCCTCCGGAAGGTTGGGATGGTGGTGTCGGTTTTGTATCTGCAGAAATGATTAAAACCCACTGCCCTGCCCCGGCTTCTGATATTCAGATTCTAAGGTGTGGCCCCCCACCTATGAACAAGGCCATGGCTGCTCATCTTGAGGGTCTAGGATACACACCCGAGATGCAGTTCCAGTTCTGA 846 44.92 MGFLEMVDPQILLGLAVAVVAIGVAAAFLFSSSNKSKTRGCLDPENYKEFKLVKRVQLSHNVAKFTFTLPTPTSVLGLPIGQHMSCRGKDSLGEEVIKPYTPTTLDSDIGIFELVIKMYPQGRMSHHFRELHVGDYLAVKGPKGRFKYQIGQVRAFGMLAGGSGITPMFQVARAILENPIDKTKVHLIYANVAYEDILLKEELDSLATKYADRFKIYYVLNNPPEGWDGGVGFVSAEMIKTHCPAPASDIQILRCGPPPMNKAMAAHLEGLGYTPEMQFQF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2284887 2287901 + Conep10aG0051000.1 Cone10ag0494 446292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0494 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 281 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cone10ag0494 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cone10ag0494 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491(InterPro)
Cone10ag0494 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cone10ag0494 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 277 IPR039261 -
Cone10ag0494 281 Gene3D Translation factors 40 139 - -
Cone10ag0494 281 Gene3D - 140 281 IPR039261 -
Cone10ag0494 281 SUPERFAMILY Riboflavin synthase domain-like 42 148 IPR017938 -
Cone10ag0494 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491(InterPro)
Cone10ag0494 281 FunFam NADH-cytochrome b5 reductase 40 139 - -
Cone10ag0494 281 FunFam NADH-cytochrome b5 reductase 139 281 - -
Cone10ag0494 281 CDD cyt_b5_reduct_like 50 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0494 Cone-Chr10:2284887 Cone5ag1478 Cone-Chr5:9871340 7.64E-157 dispersed
Cone10ag0494 Cone-Chr10:2284887 Cone3ag0519 Cone-Chr3:2561974 9.84E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0494 K00326 - csv:101212569 467.618