Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0552 | ATGAACGACCTAATGACCAAATCCTTCACTAACTACGTTGATCTAAAGAAGGCAGCCATGAAAGACCTAGATCTCGAATCAGGCAACCTAGAGATGATGTCATCAGCAGCAATCCACATGGACAATGATCTCAACCAATTCCTAGCAGAAGCCGAGAAGGTCAAAACAGAAATGGACTGCATCAAATCCATCCTCCTCAATCTCCAACAAGCAAACGAAGAGAGCAAATCCCTACACAAACCCGAACCCCTAAAAGCCCTGCGGGAAAAAATCAATTCCGACATCCTCACCGTCCTGAAAAACGCGCGGGCCATCCAAACCCATCTCGAAGAGATGGACCGTGCCAATGCGAGCTACAAACGACTCTCTGGACAGAAACCAAACGACAACAGCTTCACGCCGATTTACCGGGCCCGGATCGGGGTCACAAACGGGCTGAGAAAGCGACTCAAGGAGCTCATGATGGAATTTCAAGCTCTCCGACAGAAAATGATGACAGAGTATAAGGAAACGGTTGGGAGGAGATACTTTACTGTGACGGGGGAGTATCCGGGCGAGGAGGTGATAGAGAAGATCATATCGGATGGAGGGGAGGAGTATATGGGCCGAGCCATCGAATTGCATGGGAGGGGGATGGTGGTTGAGATGGTTGTGGAGATTAAGGATAGGTACGACGGGGCGAAGGAAGTGGAGAAGAGTCTGTTGGAACTGCATAGGTTGTTCATGGACATGGCGGTTATGGTGGAGGTGCAAGGGGAAAAGATGGATGATATCGAACACCACGTTTTGAGTGCTGGGCAGTATGTTAGTGATGGGACCAAGAGTTTGAAGACTGCTAAGGAGTATCAGAGAAGTAGTAGGAAGTGTATGTTTTTGGGATTGATTCTACTACTTGTGATTGTTCTTGCTATTGTCATAGGTATGACCACTTCTTGA | 936 | 47.97 | MNDLMTKSFTNYVDLKKAAMKDLDLESGNLEMMSSAAIHMDNDLNQFLAEAEKVKTEMDCIKSILLNLQQANEESKSLHKPEPLKALREKINSDILTVLKNARAIQTHLEEMDRANASYKRLSGQKPNDNSFTPIYRARIGVTNGLRKRLKELMMEFQALRQKMMTEYKETVGRRYFTVTGEYPGEEVIEKIISDGGEEYMGRAIELHGRGMVVEMVVEIKDRYDGAKEVEKSLLELHRLFMDMAVMVEVQGEKMDDIEHHVLSAGQYVSDGTKSLKTAKEYQRSSRKCMFLGLILLLVIVLAIVIGMTTS | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2571135 | 2572070 | - | Conep10aG0056900.1 | Cone10ag0552 | 446350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0552 | 311 | Pfam | Syntaxin | 46 | 252 | IPR006011 | GO:0016020(InterPro) | |
Cone10ag0552 | 311 | Gene3D | - | 39 | 172 | - | - | |
Cone10ag0552 | 311 | SMART | tSNARE_6 | 212 | 279 | IPR000727 | - | |
Cone10ag0552 | 311 | Coils | Coil | 143 | 163 | - | - | |
Cone10ag0552 | 311 | FunFam | Syntaxin 132 | 210 | 310 | - | - | |
Cone10ag0552 | 311 | FunFam | Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group | 41 | 175 | - | - | |
Cone10ag0552 | 311 | SUPERFAMILY | t-snare proteins | 41 | 272 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Cone10ag0552 | 311 | SMART | SynN_4 | 39 | 169 | IPR006011 | GO:0016020(InterPro) | |
Cone10ag0552 | 311 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 217 | 279 | IPR000727 | - | |
Cone10ag0552 | 311 | PANTHER | SYNTAXIN | 47 | 297 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0005886(PANTHER)|GO:0006886(PANTHER)|GO:0006887(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cone10ag0552 | 311 | CDD | SynN | 47 | 199 | IPR006011 | GO:0016020(InterPro) | |
Cone10ag0552 | 311 | Gene3D | - | 214 | 310 | - | - | |
Cone10ag0552 | 311 | ProSitePatterns | Syntaxin / epimorphin family signature. | 223 | 263 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cone10ag0552 | 311 | Coils | Coil | 105 | 125 | - | - | |
Cone10ag0552 | 311 | Pfam | SNARE domain | 254 | 305 | IPR000727 | - | |
Cone10ag0552 | 311 | CDD | SNARE_syntaxin1-like | 217 | 278 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0552 | Cone-Chr10:2571135 | Cone1ag0131 | Cone-Chr1:738960 | 1.54E-67 | dispersed | |
Cone10ag0552 | Cone-Chr10:2571135 | Cone3ag0576 | Cone-Chr3:2843996 | 2.20E-199 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0552 | K08486 | - | csv:101220775 | 411.764 |