Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0553 ATGCTGAAGCGGCCCGGTAAGCAACAGCACGTTGAGTCGTTTTCCGACAGGATCTACAGATTCAGAGGGGTGTTGCTACTCATCTCACTCCCCCTCATCCTCATCACCTTTGTAATCTTCTTTATGCCTGCCAGAGACGATTACTCCTTCAGCAACCGCAAGTTTTCTCCCGAACACATGCCTTCTCAAATCGCTTATGCCGTTATCTTTGATGCTGGTAGCTCAGGCAGCCGCGTCCATGTTTTCTGCTTCGACCATAATCTCGATCTCCTTCCAATTGGGAAAGATCTTGAGCTTTTCGAGCACATTGAACCAGGACTGAGTGCATATGCTGAGGATCCTAGAAAAGCTGCAGCTTCTCTAATTTCTCTTTTGGAGAAAGGACAAAGTGTGGTTCCTCGAGAGTTGCGTCCCAGAACACCTGTTAGAGTTGGGGCAACTGCTGGCTTGAGAGCACTTAAAGGGGATACTTCTGAGAAGATTTTGCAAGCGGTTAGGGATCTTTTGAAGGATAAAAGTAGCCTACAGTCGGAGCCTGGTGCGGTTTCTGTCATTGATGGGACTCAGGAAGGTTCTTATCAGTGGGTGACAATTAACTATTTGCTGGGGAATTTGGGTAAGAGATATTCAAATACAGTTGGAGTAGTTGATCTTGGGGGTGGATCTGTTCAAATGGCGTATGCTATTGCCGAAAAGGATGCTGCACCAAGGTTAATTGATGGAGAGGACGAATATGTAAGAAAAATGCATCTGAAGGGGAGAGATTATTACCTCTATGTTCACAGTTACTTGAATTATGGCTTACTTGCTGCTCGAGCAGAGATTCTAAAAGTCTCTGGTGACTCCAGCAACCCCTGTATCTTAGATGGCTATGAAGGGTCATATAAATACGGGGGAGTAGAATACAAAGCATCGGCATCTTTAGCCGGACCAAACGTGAATGACTGCAAGAGAGTAGCCTTAGAGGCTCTTAAAGTCAACGAAACAAAGTGTACCCACATGACGTGCACTTTTAATGGCATCTGGAATGGTGGTGGAGGTGATGGCCAGAAGAATCTTTTTGTCGCTTCCTTTTTCTTTGACAGGGCTGCTCAGGCTGGTTTTGCTGATCCTAACAAACCCACTGCAAATGTTCATCCTGTCGATTTTGAGGATGCAGCAAAACGTGCCTGTGAAACTAAACTTCAAGATGCCAAGTCCACTTATTCTACTCTGGACGAGAATAACCTTCCTTACTTGTGCATGGATCTTGTCTACCAATATACCCTCCTTGTAAATGGATTCGGTCTGGATCCGTGGCAAGAGATAACGTTAGTGAAGAAAGTGAAATATCACAATTCCTTCGTCGAGGCAGCATGGCCATTAGGCAGTGCTATAGAGGCTGTCTCGTCCTTAGCATAA 1401 45.47 MLKRPGKQQHVESFSDRIYRFRGVLLLISLPLILITFVIFFMPARDDYSFSNRKFSPEHMPSQIAYAVIFDAGSSGSRVHVFCFDHNLDLLPIGKDLELFEHIEPGLSAYAEDPRKAAASLISLLEKGQSVVPRELRPRTPVRVGATAGLRALKGDTSEKILQAVRDLLKDKSSLQSEPGAVSVIDGTQEGSYQWVTINYLLGNLGKRYSNTVGVVDLGGGSVQMAYAIAEKDAAPRLIDGEDEYVRKMHLKGRDYYLYVHSYLNYGLLAARAEILKVSGDSSNPCILDGYEGSYKYGGVEYKASASLAGPNVNDCKRVALEALKVNETKCTHMTCTFNGIWNGGGGDGQKNLFVASFFFDRAAQAGFADPNKPTANVHPVDFEDAAKRACETKLQDAKSTYSTLDENNLPYLCMDLVYQYTLLVNGFGLDPWQEITLVKKVKYHNSFVEAAWPLGSAIEAVSSLA 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2573323 2577440 + Conep10aG0057000.1 Cone10ag0553 446351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0553 466 FunFam Apyrase 1 186 443 - -
Cone10ag0553 466 Gene3D Exopolyphosphatase. Domain 2 186 443 - -
Cone10ag0553 466 Gene3D - 66 459 - -
Cone10ag0553 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 185 200 IPR000407 GO:0016787(InterPro)
Cone10ag0553 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 462 IPR000407 GO:0016787(InterPro)
Cone10ag0553 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 62 464 IPR000407 GO:0016787(InterPro)
Cone10ag0553 466 CDD NBD_sugar-kinase_HSP70_actin 68 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0553 Cone-Chr10:2573323 Cone11ag1570 Cone-Chr11:10891028 1.94E-25 dispersed
Cone10ag0553 Cone-Chr10:2573323 Cone3ag0577 Cone-Chr3:2845434 9.98e-318 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0553 K14641 - csv:101220305 682.174