Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0559 | ATGTATCATCCTCATCATCAGCAACATAATCCCGGCCAGCATGATGGAATTATCAAGAGCAATAATGGTAATATTAACATGCGGTGTGCGTCGTCACGGCCGGATTCGGTACATGGTAATTTGTTTCTTCCTGGACAGATAGGAAGGAACGATTCGGGACTTGTTCTCTCAACAGATGCCAAGCCCAGGCTCAAATGGACTTCTGATCTTCACCACCGTTTTATAGAGGCAGTCAATCAGCTGGGAGGACCTGATAAGGCAACTCCTAAAACGGTGATGAAGATTATGGGCATTCCTGGACTTACTTTATATCATTTGAAAAGTCATCTTCAAAAGTATAGGCTCAGCAAGAATCTGCATGGACAAGCAACTAATAGCTCATGTGGAACCCCTAAATTTGTAATGGCCGGTGAGAGATTACCTGATCATCAAGCAAATGATCAAACTTGTATCAATAATCTAAACACTATTGCACCCCACATGAACAAAAGCTTGCATATAAGTGAAGCACTAGAGATGCAAATAGAAGTTCAAAGAAGGCTACATGAACAACTTGAGGTACAACGACACTTGCAGCTCCGTATAGAAGCACAAGGCAAGTACCTACAAGCAGTGCTAGAAAAGGCTCAAGAAACCCTTGGAAAACAAGGCTCATCATCATCAGGTGCGGTAGTATTGGGATCACTTGAAGCTACAAAATTACAACTCTCCGAATTAGTCTCGAAAGTATCCAATCAGTGCCTCCAATTAGGCAGCACCGCTAATACTGGTATCACCACTTCTGCTGCTTTTCCGGATCATCATCATCATCTGAAACAAATCCAAGCCGGCTTTAACTTTTCGCATGAGGATGGCTCGGGGGATAGCTGCCTCACCTCTTGCGAGGAGAGACGGATCATGAGTAGTGAATTATCGATAAATATTAATAATAACGGAGGGCTTGTCCAGACTGGAGGAGATAGGGAAGGGATCAAGGTTATGAGCAAGAACAGGGTAGATACTGATCATCGGCAAGGAAGATTGACAAGATTGGAAAATGATGATCAAAACTCAATGCTTCGAATGCCTTATTTTGCTGCGACAGCTTTGGACTTGAATGTTGATGATGAGAACAATAACATCGATATCGGTTCTAATTCCGGTTGCAACCAATTCGACTTGAATGGGATCGGTTGGAGCTAA | 1182 | 42.98 | MYHPHHQQHNPGQHDGIIKSNNGNINMRCASSRPDSVHGNLFLPGQIGRNDSGLVLSTDAKPRLKWTSDLHHRFIEAVNQLGGPDKATPKTVMKIMGIPGLTLYHLKSHLQKYRLSKNLHGQATNSSCGTPKFVMAGERLPDHQANDQTCINNLNTIAPHMNKSLHISEALEMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGKQGSSSSGAVVLGSLEATKLQLSELVSKVSNQCLQLGSTANTGITTSAAFPDHHHHLKQIQAGFNFSHEDGSGDSCLTSCEERRIMSSELSININNNGGLVQTGGDREGIKVMSKNRVDTDHRQGRLTRLENDDQNSMLRMPYFAATALDLNVDDENNNIDIGSNSGCNQFDLNGIGWS | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2597083 | 2600004 | + | Conep10aG0057600.1 | Cone10ag0559 | 446357 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0559 | 393 | SUPERFAMILY | Homeodomain-like | 60 | 116 | IPR009057 | - | |
Cone10ag0559 | 393 | FunFam | Myb family transcription factor | 60 | 118 | - | - | |
Cone10ag0559 | 393 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 45 | 366 | IPR046955 | GO:0003700(InterPro) | |
Cone10ag0559 | 393 | Pfam | MYB-CC type transfactor, LHEQLE motif | 166 | 212 | IPR025756 | - | |
Cone10ag0559 | 393 | Coils | Coil | 168 | 188 | - | - | |
Cone10ag0559 | 393 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 61 | 116 | IPR006447 | GO:0003677(InterPro) | |
Cone10ag0559 | 393 | Pfam | Myb-like DNA-binding domain | 63 | 114 | IPR001005 | - | |
Cone10ag0559 | 393 | Gene3D | - | 60 | 118 | - | - | |
Cone10ag0559 | 393 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 118 | IPR017930 | - | |
Cone10ag0559 | 393 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0559 | Cone-Chr10:2597083 | Cone9ag0583 | Cone-Chr9:2748275 | 5.78E-47 | dispersed | |
Cone10ag0559 | Cone-Chr10:2597083 | Cone3ag0582 | Cone-Chr3:2867259 | 5.01E-227 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44198 | PF07714 | PK_Tyr_Ser-Thr | 2.30E-24 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0559 | - | - | - | 0.0 |