Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0582 | ATGGGTTCCATAAACTGGTTGAGTTTCTCTCTTTCCTCTCAAGAACTACTTCCTCCTCCACAACCAACTAGTAACAACAATCATCAAGAAGACCACTCACAAAGCACAACCCTTGGATTCAACTCCGACGAAATCTCGACCAACGACATATCGGCAACCGACTGCTTTGATCTCACTTCTCATGATTCAACTCCTCCTTCCCTCAATCTCCCTCCCCACTTTTCTATTTTCGAAGCTTTCAATCGCAACAATCAACCTCAAGATTGGAATATGAAGGGCATGGGAGGCAACACCTCAGACATGTCCATGCTGATGGGTACTAGTTCATCATGTAACGATGAAAACCAAAACCAACCAAAACTTGAAAACTTCCTTGGCCGCCATTCATTTACCGATCAAGAACACGGAACTGTCTACAACACCGCCTCTCATCATGACTACATGTTCCCAAACTGCTCTCTACAGCCTCCATCAGAGCCGGAAGGCACCACAAATGGCGGCGGCGGTAGTGCTAACAATATGAACAATGGGTCAAATATAGGGTTGTCAATGATCAAGACATGGTTGAGAAACCAACCAACACCTCCGGCACAGGTGGCGAGCGAGAGTATCGACGGAAGTACTAAAAATGCTCAGACTTTATCGCTTTCTATGAGAACAGGAGGTGGGGGTGCTAGCGGCGGTGCAGGTGGCGGCAACAGTTCTTCGTCGGACAAAAAACAGTTGGCTAAGGCTAGTACTAATGGTCCAGTCGATAGTCAATCTGGTGATATAGAAAATGGAGCTAGAAAATGTATTGATACATTCGGACAAAGAACTTCCATATACCGTGGTGTAACCAGGCATAGATGGACTGGTAGATATGAAGCTCATCTGTGGGATAATAGTTGCAGAAGAGAAGGGCAAACTAGAAAGGGAAGACAAGGGGGTTATGACAAGGAAGAGAAGGCAGCAAGGGCTTATGATCTAGCTGCCCTTAAATATTGGGGTACCACTACCACCACAAATTTCCCGATTAGCAACTACGACAAAGAGGTGGAAGAGATGAAGCACATGACTAGGCAAGAGTACGTTGCGTCTTTACGAAGGAAGAGTAGTGGGTTTTCTCGGGGTGCTTCCATTTACAGAGGAGTCACGAGACACCATCAACATGGTAGATGGCAAGCAAGAATCGGAAGAGTTGCAGGGAACAAAGACCTCTACTTGGGCACCTTTAGCACTCAGGAAGAAGCAGCCGAGGCCTACGACATTGCCGCCGTCAAGTTCCGGGGCCTAAATGCGGTAACGAACTTTGACATGAGCAGATATGATGTGAAGTCCATATTAGAAAGCACGACATTGCCGATTGGAGGTGCTACAAAGCGTTTGAAAGAGATTGATCAGAAGGCAGTCATTGATGCACAAAGAACAGCCGAAGACCATGACAACATGAGCTCGCACTTAACCGATTCCATCGCTAGTTCTTACAACCATGCTGCAGGATGGCCCACTATTGCATTTCAACAGCCGCAACATCCTTATAACAACATGCAACATTACCCATATCAACAGCAACAGCAACAGCAACAACAACAACAACAAAGGGTTTGGTGCAAGCAAGAACAAGATTGTGACCATAATTCAAGTAGTACCCAATTAGGGTTTCATGATCTACACCAATTTCAATTAGGTAACACCCATAATTTCTTTCAGCATAACTCAGTTCTCCACAATCTCATGAGCATGGACTCTACCTCATTGGAACACAGCTCTGGCTCTAACAACTCCATCATCTATAACAATGGACTTGGATATGGAAGCAACTATAATCATGTCATCCCAATGGGCACTACAACAGTCATGGCCAGTGATCATGATCATAACGGCATGAACGACAATCATGATCAGGTTAAAGCTGCGCTAGGATTTGAAACCGGGGTTGGGTCAGGAGAATATGCTTATAATAATCATGCAAGGAATATGTACTATCTTTCACAGCAGCAATCTTCATCTTCATCGTCAGGTGCAGTGAAAGCTAGTGTGTACCAAGATCATCAGGCCGGATCGGCGTGCAATAACTGGGTCCCAACTGCAGTTCCGACTCTAGCTGCTCGGCCTAGTAACATGGCAGTTTGTCATGGAGCACCTACTTTCACTATTTGGAATGATACATAG | 2154 | 45.4 | MGSINWLSFSLSSQELLPPPQPTSNNNHQEDHSQSTTLGFNSDEISTNDISATDCFDLTSHDSTPPSLNLPPHFSIFEAFNRNNQPQDWNMKGMGGNTSDMSMLMGTSSSCNDENQNQPKLENFLGRHSFTDQEHGTVYNTASHHDYMFPNCSLQPPSEPEGTTNGGGGSANNMNNGSNIGLSMIKTWLRNQPTPPAQVASESIDGSTKNAQTLSLSMRTGGGGASGGAGGGNSSSSDKKQLAKASTNGPVDSQSGDIENGARKCIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISNYDKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAVKFRGLNAVTNFDMSRYDVKSILESTTLPIGGATKRLKEIDQKAVIDAQRTAEDHDNMSSHLTDSIASSYNHAAGWPTIAFQQPQHPYNNMQHYPYQQQQQQQQQQQQRVWCKQEQDCDHNSSSTQLGFHDLHQFQLGNTHNFFQHNSVLHNLMSMDSTSLEHSSGSNNSIIYNNGLGYGSNYNHVIPMGTTTVMASDHDHNGMNDNHDQVKAALGFETGVGSGEYAYNNHARNMYYLSQQQSSSSSSGAVKASVYQDHQAGSACNNWVPTAVPTLAARPSNMAVCHGAPTFTIWNDT | 717 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2729860 | 2733439 | - | Conep10aG0059900.1 | Cone10ag0582 | 446380 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0582 | 717 | Pfam | AP2 domain | 375 | 424 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | SUPERFAMILY | DNA-binding domain | 373 | 434 | IPR016177 | GO:0003677(InterPro) | |
Cone10ag0582 | 717 | Gene3D | AP2/ERF domain | 275 | 340 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | Gene3D | AP2/ERF domain | 374 | 434 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | SUPERFAMILY | DNA-binding domain | 274 | 340 | IPR016177 | GO:0003677(InterPro) | |
Cone10ag0582 | 717 | PRINTS | Ethylene responsive element binding protein signature | 414 | 434 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | PRINTS | Ethylene responsive element binding protein signature | 276 | 287 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | MobiDBLite | consensus disorder prediction | 229 | 255 | - | - | |
Cone10ag0582 | 717 | CDD | AP2 | 373 | 434 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | SMART | rav1_2 | 275 | 344 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | SMART | rav1_2 | 374 | 438 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | CDD | AP2 | 274 | 340 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | MobiDBLite | consensus disorder prediction | 156 | 179 | - | - | |
Cone10ag0582 | 717 | MobiDBLite | consensus disorder prediction | 153 | 179 | - | - | |
Cone10ag0582 | 717 | ProSiteProfiles | AP2/ERF domain profile. | 275 | 338 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 274 | 340 | - | - | |
Cone10ag0582 | 717 | MobiDBLite | consensus disorder prediction | 215 | 259 | - | - | |
Cone10ag0582 | 717 | ProSiteProfiles | AP2/ERF domain profile. | 374 | 432 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone10ag0582 | 717 | FunFam | AP2-like ethylene-responsive transcription factor | 373 | 434 | - | - | |
Cone10ag0582 | 717 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 178 | 524 | - | - | |
Cone10ag0582 | 717 | MobiDBLite | consensus disorder prediction | 14 | 44 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0582 | Cone-Chr10:2729860 | Cone11ag0188 | Cone-Chr11:914968 | 4.60E-112 | dispersed | |
Cone10ag0582 | Cone-Chr10:2729860 | Cone5ag1468 | Cone-Chr5:9723706 | 1.65E-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44200 | PF06697 | DUF1191 | 1.40E-69 | CL0661 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0582 | K09285 | - | vvi:100241060 | 783.482 |