Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0582 ATGGGTTCCATAAACTGGTTGAGTTTCTCTCTTTCCTCTCAAGAACTACTTCCTCCTCCACAACCAACTAGTAACAACAATCATCAAGAAGACCACTCACAAAGCACAACCCTTGGATTCAACTCCGACGAAATCTCGACCAACGACATATCGGCAACCGACTGCTTTGATCTCACTTCTCATGATTCAACTCCTCCTTCCCTCAATCTCCCTCCCCACTTTTCTATTTTCGAAGCTTTCAATCGCAACAATCAACCTCAAGATTGGAATATGAAGGGCATGGGAGGCAACACCTCAGACATGTCCATGCTGATGGGTACTAGTTCATCATGTAACGATGAAAACCAAAACCAACCAAAACTTGAAAACTTCCTTGGCCGCCATTCATTTACCGATCAAGAACACGGAACTGTCTACAACACCGCCTCTCATCATGACTACATGTTCCCAAACTGCTCTCTACAGCCTCCATCAGAGCCGGAAGGCACCACAAATGGCGGCGGCGGTAGTGCTAACAATATGAACAATGGGTCAAATATAGGGTTGTCAATGATCAAGACATGGTTGAGAAACCAACCAACACCTCCGGCACAGGTGGCGAGCGAGAGTATCGACGGAAGTACTAAAAATGCTCAGACTTTATCGCTTTCTATGAGAACAGGAGGTGGGGGTGCTAGCGGCGGTGCAGGTGGCGGCAACAGTTCTTCGTCGGACAAAAAACAGTTGGCTAAGGCTAGTACTAATGGTCCAGTCGATAGTCAATCTGGTGATATAGAAAATGGAGCTAGAAAATGTATTGATACATTCGGACAAAGAACTTCCATATACCGTGGTGTAACCAGGCATAGATGGACTGGTAGATATGAAGCTCATCTGTGGGATAATAGTTGCAGAAGAGAAGGGCAAACTAGAAAGGGAAGACAAGGGGGTTATGACAAGGAAGAGAAGGCAGCAAGGGCTTATGATCTAGCTGCCCTTAAATATTGGGGTACCACTACCACCACAAATTTCCCGATTAGCAACTACGACAAAGAGGTGGAAGAGATGAAGCACATGACTAGGCAAGAGTACGTTGCGTCTTTACGAAGGAAGAGTAGTGGGTTTTCTCGGGGTGCTTCCATTTACAGAGGAGTCACGAGACACCATCAACATGGTAGATGGCAAGCAAGAATCGGAAGAGTTGCAGGGAACAAAGACCTCTACTTGGGCACCTTTAGCACTCAGGAAGAAGCAGCCGAGGCCTACGACATTGCCGCCGTCAAGTTCCGGGGCCTAAATGCGGTAACGAACTTTGACATGAGCAGATATGATGTGAAGTCCATATTAGAAAGCACGACATTGCCGATTGGAGGTGCTACAAAGCGTTTGAAAGAGATTGATCAGAAGGCAGTCATTGATGCACAAAGAACAGCCGAAGACCATGACAACATGAGCTCGCACTTAACCGATTCCATCGCTAGTTCTTACAACCATGCTGCAGGATGGCCCACTATTGCATTTCAACAGCCGCAACATCCTTATAACAACATGCAACATTACCCATATCAACAGCAACAGCAACAGCAACAACAACAACAACAAAGGGTTTGGTGCAAGCAAGAACAAGATTGTGACCATAATTCAAGTAGTACCCAATTAGGGTTTCATGATCTACACCAATTTCAATTAGGTAACACCCATAATTTCTTTCAGCATAACTCAGTTCTCCACAATCTCATGAGCATGGACTCTACCTCATTGGAACACAGCTCTGGCTCTAACAACTCCATCATCTATAACAATGGACTTGGATATGGAAGCAACTATAATCATGTCATCCCAATGGGCACTACAACAGTCATGGCCAGTGATCATGATCATAACGGCATGAACGACAATCATGATCAGGTTAAAGCTGCGCTAGGATTTGAAACCGGGGTTGGGTCAGGAGAATATGCTTATAATAATCATGCAAGGAATATGTACTATCTTTCACAGCAGCAATCTTCATCTTCATCGTCAGGTGCAGTGAAAGCTAGTGTGTACCAAGATCATCAGGCCGGATCGGCGTGCAATAACTGGGTCCCAACTGCAGTTCCGACTCTAGCTGCTCGGCCTAGTAACATGGCAGTTTGTCATGGAGCACCTACTTTCACTATTTGGAATGATACATAG 2154 45.4 MGSINWLSFSLSSQELLPPPQPTSNNNHQEDHSQSTTLGFNSDEISTNDISATDCFDLTSHDSTPPSLNLPPHFSIFEAFNRNNQPQDWNMKGMGGNTSDMSMLMGTSSSCNDENQNQPKLENFLGRHSFTDQEHGTVYNTASHHDYMFPNCSLQPPSEPEGTTNGGGGSANNMNNGSNIGLSMIKTWLRNQPTPPAQVASESIDGSTKNAQTLSLSMRTGGGGASGGAGGGNSSSSDKKQLAKASTNGPVDSQSGDIENGARKCIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISNYDKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAVKFRGLNAVTNFDMSRYDVKSILESTTLPIGGATKRLKEIDQKAVIDAQRTAEDHDNMSSHLTDSIASSYNHAAGWPTIAFQQPQHPYNNMQHYPYQQQQQQQQQQQQRVWCKQEQDCDHNSSSTQLGFHDLHQFQLGNTHNFFQHNSVLHNLMSMDSTSLEHSSGSNNSIIYNNGLGYGSNYNHVIPMGTTTVMASDHDHNGMNDNHDQVKAALGFETGVGSGEYAYNNHARNMYYLSQQQSSSSSSGAVKASVYQDHQAGSACNNWVPTAVPTLAARPSNMAVCHGAPTFTIWNDT 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2729860 2733439 - Conep10aG0059900.1 Cone10ag0582 446380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0582 717 Pfam AP2 domain 375 424 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 SUPERFAMILY DNA-binding domain 373 434 IPR016177 GO:0003677(InterPro)
Cone10ag0582 717 Gene3D AP2/ERF domain 275 340 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 Gene3D AP2/ERF domain 374 434 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 SUPERFAMILY DNA-binding domain 274 340 IPR016177 GO:0003677(InterPro)
Cone10ag0582 717 PRINTS Ethylene responsive element binding protein signature 414 434 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 PRINTS Ethylene responsive element binding protein signature 276 287 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 MobiDBLite consensus disorder prediction 229 255 - -
Cone10ag0582 717 CDD AP2 373 434 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 SMART rav1_2 275 344 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 SMART rav1_2 374 438 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 CDD AP2 274 340 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 MobiDBLite consensus disorder prediction 156 179 - -
Cone10ag0582 717 MobiDBLite consensus disorder prediction 153 179 - -
Cone10ag0582 717 ProSiteProfiles AP2/ERF domain profile. 275 338 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 FunFam AP2-like ethylene-responsive transcription factor ANT 274 340 - -
Cone10ag0582 717 MobiDBLite consensus disorder prediction 215 259 - -
Cone10ag0582 717 ProSiteProfiles AP2/ERF domain profile. 374 432 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone10ag0582 717 FunFam AP2-like ethylene-responsive transcription factor 373 434 - -
Cone10ag0582 717 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 178 524 - -
Cone10ag0582 717 MobiDBLite consensus disorder prediction 14 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0582 Cone-Chr10:2729860 Cone11ag0188 Cone-Chr11:914968 4.60E-112 dispersed
Cone10ag0582 Cone-Chr10:2729860 Cone5ag1468 Cone-Chr5:9723706 1.65E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44200 PF06697 DUF1191 1.40E-69 CL0661 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0582 K09285 - vvi:100241060 783.482