Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0589 ATGAAAATCGAGCAAAGCTCCTACCGTGACGTTCCGAGACTGAATTTCGAGAATCTCAGAGTGATTTCAGCTCTTGGAAGGGGAGCTAAGGGCGTGGTGTTTCTGGCAGAAAATTTGGTCTCTGGAGAATTGGTTGCTCTGAAAGTGATTTACAGAGCTTTGATTGAGAGAAATAGTAAATCCGTCGATAATGCCAGTACTGATGAGTACAGAAGGATCTGCTTCGAGCAGCAGGTGCTACACCATTTTGATCATCCGCTTTTACCGAAATTGCGTGGAGTTTTAGATACTGAGAAAATCATCGGTTACGCCATTGATTACTGCTCCGGTCGCGATTTGAATTCTCTCAGAAAGAGACAGACAGAGAAGATGTTCGCTGATGACGCGATTAGGTTTTATGCTGCGGAATTGATCTTGGCATTAGAGTATCTTCATAGCTTAGGGATCGTTTACAGAGATCTGAAACCAGAAAACATCATGATCCAAGAAACCGGTCATATAATGCTCGTCGATTTCGATCTCTCTACAAAACTGTCGTCAAAATTATCTCCTAAAATTTCCCGTCCATCTAATACAAAGTCTACCAAACCAATCAAATCTCCCTCCGTCAGGAAAAGGCGGTTCTCTCCATGCTGGCAGTTCTGCAACTCAGGCATATCACCCGAAGAAGACCCGGTCGACTCGGGCACCATCTCCAATCGGGCCGAGTCAGACTCAGCCAAGAAATCCAACTCGTTCGTCGGCACAGAGGAATACATTCCGCCCGAGATCGTTGCTGGCACAGGTCACGATTTCTCTGCGGACTGGTGGTCCCTAGGAGTAGTTGTACACGAGATGCTGTACGGAACGACACCATTCAGAGGGTCAGACAGGAAGGAGACGTTTTATCGGGTATTGAATAAGACGCCCGAGCTAACTGGCGAAGCGACGTCGTTACGTGACTTGATTAGAAAATTACTGGAAAAGGACCCAAAGCAGAGAATCAAAGTGGAGGAGATAAAAAGACATGAATTTTTTAAAGGAATGGAATGGGATTCGGTTTTGAGAATCTCAAGGCCGCCGTATATTCCTCCTCCTGATAGTCATAGGAGTGAGATGGAGGAGGGTATTTATGGAAATAAGAAAATTGATGTGGAAGCATTTGTTGAGGAGATTTTTGAAGATAGAAGTGATCATGAGGTTGAAGGTAAGGATGATCGGAAGGCGTGGGTGGGTTGA 1218 45.24 MKIEQSSYRDVPRLNFENLRVISALGRGAKGVVFLAENLVSGELVALKVIYRALIERNSKSVDNASTDEYRRICFEQQVLHHFDHPLLPKLRGVLDTEKIIGYAIDYCSGRDLNSLRKRQTEKMFADDAIRFYAAELILALEYLHSLGIVYRDLKPENIMIQETGHIMLVDFDLSTKLSSKLSPKISRPSNTKSTKPIKSPSVRKRRFSPCWQFCNSGISPEEDPVDSGTISNRAESDSAKKSNSFVGTEEYIPPEIVAGTGHDFSADWWSLGVVVHEMLYGTTPFRGSDRKETFYRVLNKTPELTGEATSLRDLIRKLLEKDPKQRIKVEEIKRHEFFKGMEWDSVLRISRPPYIPPPDSHRSEMEEGIYGNKKIDVEAFVEEIFEDRSDHEVEGKDDRKAWVG 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2760059 2761430 + Conep10aG0060600.1 Cone10ag0589 446387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0589 405 Gene3D Transferase(Phosphotransferase) domain 1 237 358 - -
Cone10ag0589 405 Gene3D Transferase(Phosphotransferase) domain 1 112 181 - -
Cone10ag0589 405 MobiDBLite consensus disorder prediction 221 245 - -
Cone10ag0589 405 FunFam Serine/threonine-protein kinase OXI1 112 180 - -
Cone10ag0589 405 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Cone10ag0589 405 Pfam Protein kinase domain 21 183 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 Pfam Protein kinase domain 239 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 PANTHER FLIPPASE KINASE 1-RELATED 9 362 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone10ag0589 405 MobiDBLite consensus disorder prediction 226 245 - -
Cone10ag0589 405 FunFam Serine/threonine-protein kinase OXI1 241 358 - -
Cone10ag0589 405 SMART serkin_6 19 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 ProSiteProfiles Protein kinase domain profile. 19 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 ProSiteProfiles AGC-kinase C-terminal domain profile. 340 405 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0589 405 SUPERFAMILY Protein kinase-like (PK-like) 12 364 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0589 Cone-Chr10:2760059 Cone11ag1483 Cone-Chr11:10511741 3.80E-89 dispersed
Cone10ag0589 Cone-Chr10:2760059 Cone3ag0616 Cone-Chr3:3050306 5.29E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81821 PF07714 PK_Tyr_Ser-Thr 6.20E-48 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0589 K20714 - csv:101223223 452.21