Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0603 | ATGGAAGAGGAGAAGATTGAGGACCATGAACAGGTTCTAGAAGGTGGGATATGGAGTTCGTGTTCAGTGGTGGGTAAGAGTGGAGGGGGAAGCTTTGTAGAGAGAAGGGCAGCTAAGTTTGGAAGTGGGTTCAATGCGCCTAGGATCAATACGCCCAGGTTTCGAACCACTAGCCCGTTGGTCTCACCTGCGGCTCATTCTCCTCGTATTACTATTCCGCCTGGCATTAGCCCCACTGCCTTGCTTGATTCGCCTATCATGCTCCCTAATAGACAGGCTCTTCCATCTCCTACGACCGGAACTTATTGTATCCCTTTAAATGATCAATGCTCGATCCGAAATTCTATGCTACTTGAAGATGGATATAAGGGGAGTCCTGTAGATGGTTCATCCTTCAGATTGAAGCCTCCTGACGAGCACAATTTCGCCCCTGGATTTTCTGGTTATCAAACTCAGGATGTTCTTGATATTGATTATCAGGATCTTATATCAAAGCAACCGCCTATCGACTTTGAATTCTCTGTTCAATATCCGAAAGAAGCTACTGCAGTAAGCTGTGCAGGAGATTCATCTACTGATACTAACAACTTCAACGACGCGATATTATATAATACTAAACCAGATGAAGTTCAAGCGCATATTCTTAATCAAGTTTTTAATCGAACATCTCTTCCCAATGAATGCATTCAAGGTGAGGATAATGAACCACATCATCATCAACCCGATCAGAACATTTACCCATCCTCTTCAGGACTAGCAAGGAATTCAGAAGATGGATATAACTGGAGAAAATACGGACAAAAACAAGTAAAAGGAAGCGAATATCCAAGAAGCTACTATAAATGTACTCATCCAAATTGCCAAGTGAAGAAGAAAGTGGAAAGATCCCTTGATGGTCAAATAACCGAAATCATATACAAAGGCACTCACAGTCATGCAAAACCTCACCCATGTCGCCGGGCCCCATCCGGATCGACGTTTCCATCTGACCAGGCTTCAGAGGTGGGTGAAGGAAGTAGGACCTATGTCAAAGCAGAAGGTGGGCCTGTCTGGATGAGTATTCAATCTGATTTGAGGGGTGATGGGTTGGAAAGGGGGACCCCCTCGGCTTCTGTTGTAACTGATGTTTCTGATCCGTTATTGACTGCTCAAGGGAAATCTATTGGGTTGTTTGGATCCGTTCAAACTCCTGAGCTTACTTCTACTGTTGCTAGTCATGAAGATGATGATGATGGGGCCACTCAGGGAAGTGTATCATTCAGTGATGATGCTGATGATGTAGAATCTGAATCAAAAAGAAGGCGGATGGAGACCTGTCAGATTGAAACAAATTTGGCGTCTAGATCTGTCAGAGAACCAAGAGTTGTTGTCCAAATAGAGACTGAAATAGACATTCTTGATGATGGTTACCGCTGGAGAAAATACGGGCAAAAAGTCGTCAAAGGAAACCCTAATCCTAGGAGCTACTACAAATGCACAAGTCCTGGATGTTTAGTTAGAAAGCACGTAGAGCGGGCCCCGCACGATCTCAAATTCGTGATCACAACATATGAAGGAAAACACAACCATGAGGTGCCTGCTGCTAGAAACAGCAACCAAATAAATTCAAGCGGCAATGGTGATAATGCAAACCATTCTGCTGTTTCCTGTCAGTCATCCGTGACCTTACCTAGAAGCTCTACCATTCCTTTGCCCGATCAAACCCATATTCCGGACCCCACAACTTATTTTGAACATAAACCTGAATTTAACGACGAGTATTTGAGATCAGGTATTCTCGGGAGTTTTAGTAATGACATGAAAATGGGGACTCCATTCATGTTTCAAATGAAGCTTCCTTCCTTGCAGAATACTGTGTCTTATGGCTCATTTGGAATAAACGTGGGTTCTTTGGTACCGGGGATTCAGGATTTTCCTGTTTCTCTGCCATTAAATCCTCCTCCGATGCGAAACTATTCAATGGCTGAATTTAATTTTAACAGCGGAAGATCAATGGCTCAGATGCAGCCGTTTATGACCAGGCAGCAGATGAGGGAGAATGAGGTCAGGTATCTAAAGCTCAAACAAGAACAGGATGATAATGTTTATGATGCTTGTTCATCAACGGTGGGGCATCATCAACAAATCATGGGAAAGCTTCCCTAG | 2145 | 43.68 | MEEEKIEDHEQVLEGGIWSSCSVVGKSGGGSFVERRAAKFGSGFNAPRINTPRFRTTSPLVSPAAHSPRITIPPGISPTALLDSPIMLPNRQALPSPTTGTYCIPLNDQCSIRNSMLLEDGYKGSPVDGSSFRLKPPDEHNFAPGFSGYQTQDVLDIDYQDLISKQPPIDFEFSVQYPKEATAVSCAGDSSTDTNNFNDAILYNTKPDEVQAHILNQVFNRTSLPNECIQGEDNEPHHHQPDQNIYPSSSGLARNSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLDGQITEIIYKGTHSHAKPHPCRRAPSGSTFPSDQASEVGEGSRTYVKAEGGPVWMSIQSDLRGDGLERGTPSASVVTDVSDPLLTAQGKSIGLFGSVQTPELTSTVASHEDDDDGATQGSVSFSDDADDVESESKRRRMETCQIETNLASRSVREPRVVVQIETEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCLVRKHVERAPHDLKFVITTYEGKHNHEVPAARNSNQINSSGNGDNANHSAVSCQSSVTLPRSSTIPLPDQTHIPDPTTYFEHKPEFNDEYLRSGILGSFSNDMKMGTPFMFQMKLPSLQNTVSYGSFGINVGSLVPGIQDFPVSLPLNPPPMRNYSMAEFNFNSGRSMAQMQPFMTRQQMRENEVRYLKLKQEQDDNVYDACSSTVGHHQQIMGKLP | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2835417 | 2838930 | + | Conep10aG0062000.1 | Cone10ag0603 | 446401 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0603 | 714 | SUPERFAMILY | WRKY DNA-binding domain | 459 | 526 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | FunFam | WRKY transcription factor | 246 | 316 | - | - | |
Cone10ag0603 | 714 | Pfam | WRKY DNA -binding domain | 467 | 524 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | Pfam | WRKY DNA -binding domain | 257 | 312 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | MobiDBLite | consensus disorder prediction | 309 | 338 | - | - | |
Cone10ag0603 | 714 | ProSiteProfiles | WRKY domain profile. | 461 | 526 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | SMART | WRKY_cls | 256 | 314 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | SMART | WRKY_cls | 466 | 525 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | ProSiteProfiles | WRKY domain profile. | 257 | 315 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | FunFam | WRKY transcription factor 57 | 452 | 526 | - | - | |
Cone10ag0603 | 714 | MobiDBLite | consensus disorder prediction | 402 | 435 | - | - | |
Cone10ag0603 | 714 | Gene3D | WRKY domain | 248 | 316 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | MobiDBLite | consensus disorder prediction | 227 | 253 | - | - | |
Cone10ag0603 | 714 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 226 | 539 | IPR044810 | GO:0003700(InterPro) | |
Cone10ag0603 | 714 | SUPERFAMILY | WRKY DNA-binding domain | 256 | 315 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | Gene3D | WRKY domain | 453 | 519 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone10ag0603 | 714 | MobiDBLite | consensus disorder prediction | 526 | 550 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0603 | Cone-Chr10:2835417 | Cone14ag1277 | Cone-Chr14:10214634 | 1.78E-109 | dispersed | |
Cone6ag0843 | Cone-Chr6:4302580 | Cone10ag0603 | Cone-Chr10:2835417 | 1.27E-14 | dispersed | |
Cone10ag0603 | Cone-Chr10:2835417 | Cone3ag0629 | Cone-Chr3:3107909 | 0 | wgd | |
Cone10ag0603 | Cone-Chr10:2835417 | Cone5ag0939 | Cone-Chr5:4013009 | 2.14E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44201 | PF11221 | Med21 | 3.20E-19 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0603 | K18835 | - | mdm:103451420 | 735.717 |