Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0604 ATGACCGGCAAGGCGAAGCCGAAGAAGCACACGGCGAAAGAGATTGCGGCGAAGATCGACGCCGCCACGACCAACAGGGGAGGAGGCAAGGCGGGACTAGCTGACCGGACCGGTCAAGAAAAGGGCGGCCACGCTAAGTACGAATGCCCCCACTGTAAGACCACCGTGCCGGACGTCAAGTCGATGCAGATCCATCACGACGCTAAGCACCCTAAGATCCCCTTTGAGGAGGATAAGATTGTGAATCGTCACGTTAGTCTTCCTGAGACATCTACGAAGCCCAAGCCTGGCATAAGAGGCTAG 303 57.1 MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRTGQEKGGHAKYECPHCKTTVPDVKSMQIHHDAKHPKIPFEEDKIVNRHVSLPETSTKPKPGIRG 100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2839418 2840708 - Conep10aG0062100.1 Cone10ag0604 446402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0604 100 SUPERFAMILY Expressed protein At2g23090/F21P24.15 28 77 - -
Cone10ag0604 100 MobiDBLite consensus disorder prediction 1 50 - -
Cone10ag0604 100 ProSitePatterns Zinc finger C2H2 type domain signature. 49 70 IPR013087 -
Cone10ag0604 100 PANTHER GEO09665P1-RELATED 1 83 IPR045230 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1692 Cone-Chr1:57948472 Cone10ag0604 Cone-Chr10:2839418 7.63E-55 wgd
Cone10ag0604 Cone-Chr10:2839418 Cone3ag0630 Cone-Chr3:3112399 3.34E-67 wgd
Cone10ag0604 Cone-Chr10:2839418 Cone5ag0938 Cone-Chr5:4011942 1.80E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0604 - - - 0.0