Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0630 ATGGCCTCCCTTTCTTGTTCGGCTTCCGACTTGGTCCCCCTCCTTGCCGCCAACTCAAATGCTTCCTCCACCGCCATAGCTGAATTCTTCTGTTCCCGGTTCGACACCATTTCCAACAAACTCACCGACACGGCTTATGCCGTGGACAACACATACCTTCTATTCTCGGCTTACCTAGTCTTCGCCATGCAGCTCGGGTTTGCCATGTTATGTGCCGGATCGGTCCGGGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTCGATGCAGCTGCTGGAGGACTCTCTTACTATCTCTTCGGCTTCGCCTTTGCCTTTGGTGCTCCTTCTAATGGTTTCATAGGTCGCCACTTTTTTGGTCTTAGGGATTTTCCTTCTCCTCTAATGGGGGACTATAGCTTTTTCCTTTACCAGTGGGCTTTTGCTATTGCGGCTGCGGGGATAACTAGTGGGTCCATTGCTGAAAGGACCCAATTTGTAGCTTACCTTATTTATTCCACCTTCTTAACTGGTTTTGTGTACCCTGTAGTTTCACATTGGTTTTGGTCAGCGGATGGTTGGGCCAGCCCAACCCGACCCGATGAATTGTTATTTGGTTCGGGTGTGATCGATTTCGCCGGTTCCGGGGTTGTCCACATGGTTGGGGGTATTGCCGGTTTGTGGGGTGCTTTAATTGAAGGCCCACGGATCGGTCGGTTTGATCATTCAGGCCGGCCCATTGTGTTACGTGGTCACAGCGCATCATTGGTCGTACTCGGTTCGTTTTTACTATGGTTCGGTTGGTATGGATTTAACCCGGGTTCATTTCTAACCATCTTGAGGAGCTACGGTGATGGTGGGACATACTACGGCCAATGGAGCGCCATCGGGAGGACAGCTGTCACTACGACACTGGCCGGATGCACAGCTGCCCTCACAACTTTGTTTGGCAAACGCTTGCTGGTGGGGCACTGGAGTGTGATTGATGTTTGTAACGGGCTCTTAGGGGGCTTTGCTGCAATCACATCAGGATGTTCTGTTGTAGAGCCATGGGCCGCAATAGTTTGTGGGTTTGGAGCATCATGGGTTTTGATTGGGTGGAACAAGGTAGCAGAAAAGCTTAAGTATGACGACCCATTAGAGGCGGCCCAATTACACGGTGGTTGTGGGGCTTGGGGTTTAATATTCACAGGCTTGTTTGCTACAGAGGCCTATGTAAAAGAGGTCTACCCAGGAAGGCCGGGCCGGCCATATGGACTACTCATGGGCGGTGGTGGGAAGCTCTTAGCAGCCCAAATCATCCAGATTCTAGTGGTATTGGGCTGGGTCACGGCCACTATGGGCCCATTATTTTATGTTCTGAACAAACTGAAGTTGTTGCGGATATCGAGAGATGATGAGATGGCAGGCATGGATTTAACAAGGCATGGTGGGTTTGCTTACGCGTACCATGATGAAGATGATCCGTCTAGTAAGCCTGCCTTTATGATGAGAAGAGTGGAGCCCACTGATGGAAGCCCTACCGTCTGA 1512 50.86 MASLSCSASDLVPLLAANSNASSTAIAEFFCSRFDTISNKLTDTAYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDFPSPLMGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPVVSHWFWSADGWASPTRPDELLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRPIVLRGHSASLVVLGSFLLWFGWYGFNPGSFLTILRSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLVGHWSVIDVCNGLLGGFAAITSGCSVVEPWAAIVCGFGASWVLIGWNKVAEKLKYDDPLEAAQLHGGCGAWGLIFTGLFATEAYVKEVYPGRPGRPYGLLMGGGGKLLAAQIIQILVVLGWVTATMGPLFYVLNKLKLLRISRDDEMAGMDLTRHGGFAYAYHDEDDPSSKPAFMMRRVEPTDGSPTV 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3005138 3006649 + Conep10aG0064700.1 Cone10ag0630 446428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0630 503 FunFam Ammonium transporter 30 490 - -
Cone10ag0630 503 Gene3D Ammonium transporter AmtB like domains 29 493 IPR029020 -
Cone10ag0630 503 PANTHER AMMONIUM TRANSPORTER 22 484 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Cone10ag0630 503 Pfam Ammonium Transporter Family 52 475 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cone10ag0630 503 SUPERFAMILY Ammonium transporter 46 456 - -
Cone10ag0630 503 NCBIfam ammonium transporter 49 475 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cone10ag0630 503 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0630 Cone-Chr10:3005138 Cone4ag0373 Cone-Chr4:1686595 8.51E-261 dispersed
Cone10ag0630 Cone-Chr10:3005138 Cone7ag0360 Cone-Chr7:1565355 9.81E-267 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0630 K03320 - mdm:103414323 830.091