Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0652 ATGTCGAATCGGTGGTGGACAGGCGGCCAATTGGGTCTACCAGCTGGAATTGATCATTATAACTCCAGATCATCCCCTATGAGAAAACCAGATCTAGGGATCTCGATCAACAGCATCCATAGCGGAGCCAGACAGAGCGGTGGCGGCAGTGGTGGTGGTGATGAAGAAGAAGACAGAGAAAATACCGATGAGCCAAAAGAAGGAGCCATTGAAGTAGCCACTAGACGGCCTAGAGGCCGTCCTCCGGGATCAAAAAACAAACCAAAACCACCAATCTTTGTCACTAGGGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATAACAAATGGAACGGATGTGGCTGAAAGTGTGGCCCAGTTTTCCCGGAGGCGGCAACGTGGTGTCTGTGTCCTCAGTGGTAGCGGCACCGTCACCAACGTCACCCTTCGACAACCATCGGCTTCCGGTGCGGTTTTAGGGCTTCAGGGCCGGTTCGAGATTCTTTCCTTAACCGGAGCATTTCTACCTGGACCAGCCCCACCAGGGTCTACAGGGCTAACCATTTACTTAGCCAGCGGTCAGGGTCAAGTCGTTGGTGGTAGCGTGGTGGGGCCACTCACGGCTGCAGGCCCAGTAATGGTGATCGCTGCAACGTTTTCCAACGCGACATATGAGAGATTGCCCTTGGAGGATGAAGAAGAAGCCGGTGGCGATCAGGCTCCAGGCTTTGGGTCTGGAGGTGGTAGTGCCGTCGAAAGATCTCCACCAGGGATTGGAGGAAGTGGTGGGCCACATCAAGGAGGAGTACCAGATCCTTCGTCCATGTCAATTTATAATCTGCCACCGAATTTGCTACCAAATGGTGGACAATTAAACCATGAGGCTTACTCTTGGGCTCATGGTGGCCGGACACCATTTTAA 906 52.76 MSNRWWTGGQLGLPAGIDHYNSRSSPMRKPDLGISINSIHSGARQSGGGSGGGDEEEDRENTDEPKEGAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEITNGTDVAESVAQFSRRRQRGVCVLSGSGTVTNVTLRQPSASGAVLGLQGRFEILSLTGAFLPGPAPPGSTGLTIYLASGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEDEEEAGGDQAPGFGSGGGSAVERSPPGIGGSGGPHQGGVPDPSSMSIYNLPPNLLPNGGQLNHEAYSWAHGGRTPF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3143000 3143905 - Conep10aG0066900.1 Cone10ag0652 446450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0652 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 215 IPR005175 -
Cone10ag0652 301 ProSiteProfiles PPC domain profile profile. 99 237 IPR005175 -
Cone10ag0652 301 MobiDBLite consensus disorder prediction 1 100 - -
Cone10ag0652 301 MobiDBLite consensus disorder prediction 226 276 - -
Cone10ag0652 301 CDD DUF296 103 186 IPR005175 -
Cone10ag0652 301 PIRSF ESCAROLA 20 300 IPR014476 GO:0003680(InterPro)
Cone10ag0652 301 Gene3D - 103 230 - -
Cone10ag0652 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 56 300 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone10ag0652 301 FunFam AT-hook motif nuclear-localized protein 102 229 - -
Cone10ag0652 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0652 Cone-Chr10:3143000 Cone1ag0862 Cone-Chr1:54339575 2.76E-128 dispersed
Cone10ag0652 Cone-Chr10:3143000 Cone3ag0681 Cone-Chr3:3469813 1.32E-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0652 - - - 0.0