Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0655 ATGGGAACCCCAATTAATATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGACTTAGCTTGGATTGATGGACAAGTCTTAAAGATTACCGAACAAGAAGCTGAGATCCAAACTAGCAATGGCAAGAAGGTTACTGCAAAGTTGTCAAAAATATATCCTAAGGACATGGAATCTGTGCCTGGAGGTGTTGACGACATGACAAAGCTATCTTACTTGCATGAGCCTGGAACCTATACGGGCAATATTCTTATTGCGATTAACCCATTCCAAAGACTGCCTCACATTTATGATGGTCATATGATGCAACAATACAAGGGAGCACCCTTTGGTGAACTAAGCCCCCATGTTTTTGCCGTTGCTGATGTGGCTTACAGGGCAATGATAAATGAGGGAAAAAGTAATTCGATTTTGGTCAGTGGAGAAAGTGGAGCAGGTAAAACTGAAACCACAAAAATGCTTATGAGGTATCTTGCTTTTCTGGGAGGCCGAGTTGCCACAGAGGGAAGAACTGTAGAGCAACAAGTTCTTGAATCAAATCCAGTGCTTGAAGCTTTTGGAAATGCGAAAACCATTAGAAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAAGCAAGGAAGAATATCTGGAGCAGCCATAAGAACATACCTTCTTGAGAGATCTCGTGTTTGCCAAATTGCTGATCCTGAGCGCAACTACCATTGTTTTTACCTCCTTTGTGCTGCCCCACAAGAGGATATCGAGAAATACAAGCTGGGAGATCCAAAGTCATTTCACTACCTTAACCAATCAAAATGTTATGAATTGGTTGGTGTAAGTGATGCCCATGACTACCTCGCCACTAGACGGGCTATGGACATTGTTGGAATAAGTGCAAAGGAGCAGGAAGCAATCTTTAGAGTTATTGCTGCAATTCTACATCTTGGAAACATCCTTTTTGCTAAGGGAAAGGAAGTTGATTCATCGGTTCCAAAAGATGATAAGGCCAAATTCCACCTTAAAATGGCTGCAGAGCTTCTCATGTGTGATATTGAAGGTTTGCAAGATGCATTATGTAAGCGTGTAATGATCACACCTGAAGAAGTCATAAAACGTAGCTTAGATCCTCAAAGTGCTACTATTAGTAGGGATGGTTTAGCAAAGACAATATATTCTCGTCTCTTTGACTGGTTGGTGGACAAAATTAATAATTCAATTGGACAGGATCCAGATTCAAAGTCTCTGATTGGTGTCCTTGATATCTACGGTTTTGAAAGCTTTAAGACAAACAGTTTCGAGCAGTTCTGTATCAACTTCACAAATGAGAAGCTACAGCAACATTTCAACCAGCACGTCTTTAAAATGGAACAAGAAGAATACACAAAAGAGGAGATCGATTGGAGTTACATAGAATTTGTTGACAATCAAGACGTGTTGGATCTTATTGAAAAGAAACCTGGTGGAATCATTGCTCTCCTTGACGAAGCATGTATGTTTCCAAAGTCGACACACGAAACATTTGCAAACAAACTCTATCAGACATTCAAAAACCACAAGCGTTTCATTAAGCCAAAACTTTCTCGCACGGATTTTACCGTTTCCCATTATGCTGGAGAGGTCTTATATCAATCCAATCATTTTCTGGACAAAAACAAGGACTATGTTGTTCCTGAACACCAAGATCTTTTAGGCGCTTCCAAATGCCCATTTGTAGCAGGCCTTTTCCCTCCATTGCCTGAAGAGACAGCTAAATCTTCAAAATTCTCTTCAATCGGTTCTCGTTTCAAGCTACAATTACAACAGTTAATGGAAACATTGAATTCCACAGAACCTCACTACATCAGATGTGTAAAACCAAACAATCTCTTAAAACCTGCTGTTTTCGAGAATGTTAACATTATGCAGCAACTACGCTGTGGTGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGATACCCTACTCGTCGTCCCTTCTTTGAATTTATAAACCGGTTTGGACTTCTATTCCCTGAGGTAGTTGAAGGAAACTTTGATGAAAAGAAAGCTTGCAAAAGGATACTGGAGAAGAAGGGCCTTCAAGGGTTTCAGATAGGTAAAACAAAGGTATTCCTAAGAGCAGGTCAAATGGCTGAATTGGATGCAAGGAGAGCTGAGGTACTCAGTAATGCGGCAAAAACGATCCAAAGGCGCGTAAGAACTCATATTGCTCGAAAACATTTTATTGCATTGCGAATGGCTGCCCTACATATGCAATCTATGTGTCGAGGAAGATTGGCTTGCAAAGTTTTTGATGACATGAAGAGACAGGCAGCTGCTCTGAAGATTCAAAAGAATGTTAGAAAGCATGGAGCGAGAAAATCGTATAACAACCTACATCTCTCAGCTCTTACCATACAAACGGGTTTAAGAGCAATGGCTGCTAGGAATGAGTTCAGATTCAAGAGGCAAACAAAAGCTTCAATCATCATTCAGGCTCGGTGGAGGTGCCATAAAGCTGCCAAATATTACAGTATGCTCAAGAGAGGTACAATAAAGGCACAATGTAGAATGCGAGGAAAAATTGCAAAGCGGGAACTTAGAAAACTTAAAATGGCTGCAAGAGAAACAGGTGCACTTAAAGAAGCAAAGGATAAGTTGGAAAAAACAGTGGAGGATCTTACTTGGCGCTTACAGCTTGAAAAACGTTTAAGAACAGACCTAGAAGAAGCGAAAGGACAAGAAATAGCTAAATTGCAGAACTCAATGCAAGAACTACAGAAAAAAATGGAAGATACAAGTGCAAGGTTTATTAAAGAACGAGAGGCGGCGCTAAAGAAGGCTATTGAAGAAGCTCCTCCTGTCATACAAGAGACCCAAGTTGTTGTTGAAGATACCCAGAAAGTTGAATCCTTAAATGCAGAAATAGAAAGCCTAAAGTCAACATTGGAGTCGGAGAAAAATAAATTCGAGGAAAGTGAAAGAAAATGTGAGGAAACAAGGCAGTCAATTGAAGAACAAAGGAAAAAGTTTGAAGAAACTGAGAAGAAAGCTCGGAAGCTCCAGGAATCAGTGACCAGGCTAGAAGAGAAGCTCGCCAATTTAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTGTATCTGTATCCATGGCTCCTAATAAATTCCTTTCGGGTCGCTCTCGATCAATACTTCAGAGGGTTGAAAGTAGTAGTTATGTTGGAGGGGAAGGAAGGCCAGCCTTGGATCTACACAGCCATTCGATTAACCACAGGGAATCCGATGTAAATGATAAGCCACAAAAATCACTTAATGAGAAACAGAAAGAGAATCAAGAATTGCTTATTAGATGCATTGCTCAACACCTAGGATTTGCAGGGAATAGGCCAATAGCAGCTTGTATCATTTATAAATGCCTTTTGCAATGGAGGTCATTTGAAGTGGAGAGGACCAGTGTGTTTGATCGGATCATTCAGACTACTGGTCATGCCATTGAGACACAGGATAACAATGAAGTATTGTCTTATTGGCTATCAAATGCATCAACACTTCTCCTACTACTTCAAAGGACATTGAAAGCAAGTGGGGCTGCAGGGATGGCCCCACAGCGCCGTAGATCATCTTCAGCCACTCTGTTTGGAAGGATGACACAAAGTTTCCGTGGAGCACCTCAAGGAGTGAACATGTCCTTAATCAATGGAGGGATGAGTGGTGGAGTGGATGGTTTAAGGCAAGTTGAAGCAAAGTACCCTGCTTTGCTTTTCAAACAGCAACTCACAGCTTATGTCGAGAAGATATATGGAATGATCCGAGATAATTTGAAGAAGGAAATTTCTCCATTGCTTGGACTTTGCATCCAGGCTCCAAGAACATCAAGGGCAAGCTTGGTAAAGGGGTCTTCACGTTCTGTAGCAACCACTGAAGCCCAACGTGCTCTTATTGCACATTGGCAGGGAATTGTGAAGAGCCTCAGAAATTTTTTAGACGTTTTGAAAGAAAATTATGTGCCTCCATTTTTAGTTCGCAAGGTCTTCACACAAATATTTTCTTTCATCGATGTTCAACTCTTCAACAGTCTTCTTTTAAGACGAGAATGTTGTTCGTTTAGTAATGGAGAGTATGTGAAAGCCGGATTGGCTGAATTAGAACATTGGTGTTATAAAGCCACTGATGAGTATGCAGGTTCATCTTGGGATGAGCTCAAGCATATTAGACAGGCAATCGGGTTTCTGGTCATACATCAAAAACCAAAGAAGACACTTGATGAAATTAGCCACGATCTCTGCCCTGTCCTAAGTATACAGCAGCTTTACCGGATTAGCACGATGTATTGGGACCTCAAGTACGGCACACACAGTGTTTCGTTGGAGGTTATATCGGATATGAGAGTGTTGATGACAGAAGATTCCAACCATGCAGTTAGTAATTCTTTTCTCCTGGATGATGATTCCAGCATTCCATTTTCAGTTGATGACTTGTCGAAATCATTGGAACAAATAGACACTGCAGATATCAATCCACCGCCTCTAATTCGAGAAAACTCCGGGTTTAGTTTCTTACTGCCCCGTTCAGATTAG 4554 40.91 MGTPINIIVGSHVWIEDPDLAWIDGQVLKITEQEAEIQTSNGKKVTAKLSKIYPKDMESVPGGVDDMTKLSYLHEPGTYTGNILIAINPFQRLPHIYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTIRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQIADPERNYHCFYLLCAAPQEDIEKYKLGDPKSFHYLNQSKCYELVGVSDAHDYLATRRAMDIVGISAKEQEAIFRVIAAILHLGNILFAKGKEVDSSVPKDDKAKFHLKMAAELLMCDIEGLQDALCKRVMITPEEVIKRSLDPQSATISRDGLAKTIYSRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTVSHYAGEVLYQSNHFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLPEETAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFGLLFPEVVEGNFDEKKACKRILEKKGLQGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRVRTHIARKHFIALRMAALHMQSMCRGRLACKVFDDMKRQAAALKIQKNVRKHGARKSYNNLHLSALTIQTGLRAMAARNEFRFKRQTKASIIIQARWRCHKAAKYYSMLKRGTIKAQCRMRGKIAKRELRKLKMAARETGALKEAKDKLEKTVEDLTWRLQLEKRLRTDLEEAKGQEIAKLQNSMQELQKKMEDTSARFIKEREAALKKAIEEAPPVIQETQVVVEDTQKVESLNAEIESLKSTLESEKNKFEESERKCEETRQSIEEQRKKFEETEKKARKLQESVTRLEEKLANLESENQVLRQQAVSVSMAPNKFLSGRSRSILQRVESSSYVGGEGRPALDLHSHSINHRESDVNDKPQKSLNEKQKENQELLIRCIAQHLGFAGNRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTTGHAIETQDNNEVLSYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNMSLINGGMSGGVDGLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQRALIAHWQGIVKSLRNFLDVLKENYVPPFLVRKVFTQIFSFIDVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDLKYGTHSVSLEVISDMRVLMTEDSNHAVSNSFLLDDDSSIPFSVDDLSKSLEQIDTADINPPPLIRENSGFSFLLPRSD 1517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 3164573 3174134 + Conep10aG0067200.1 Cone10ag0655 446453
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0655 1517 SMART MYSc_2a 57 718 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 MobiDBLite consensus disorder prediction 975 1003 - -
Cone10ag0655 1517 PRINTS Myosin heavy chain signature 414 442 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 PRINTS Myosin heavy chain signature 77 96 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 PRINTS Myosin heavy chain signature 181 208 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 PRINTS Myosin heavy chain signature 134 159 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 PRINTS Myosin heavy chain signature 467 495 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 816 845 - -
Cone10ag0655 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 769 IPR027417 -
Cone10ag0655 1517 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 ProSiteProfiles Dilute domain profile. 1147 1460 IPR002710 -
Cone10ag0655 1517 Pfam IQ calmodulin-binding motif 770 788 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 Pfam IQ calmodulin-binding motif 722 740 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 Pfam IQ calmodulin-binding motif 817 836 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 FunFam Myosin heavy chain 237 292 - -
Cone10ag0655 1517 ProSiteProfiles Myosin motor domain profile. 78 717 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 FunFam Class V myosin 424 559 - -
Cone10ag0655 1517 FunFam unconventional myosin-Va 819 866 - -
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 839 868 - -
Cone10ag0655 1517 Gene3D - 652 715 - -
Cone10ag0655 1517 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 SMART DIL_2 1335 1442 IPR002710 -
Cone10ag0655 1517 Gene3D - 818 867 - -
Cone10ag0655 1517 Gene3D - 718 769 - -
Cone10ag0655 1517 Gene3D - 770 817 - -
Cone10ag0655 1517 SMART iq_5 815 837 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 SMART iq_5 790 812 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 SMART iq_5 767 789 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 SMART iq_5 719 741 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 SMART iq_5 838 860 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 SMART iq_5 742 764 IPR000048 GO:0005515(InterPro)
Cone10ag0655 1517 MobiDBLite consensus disorder prediction 1079 1099 - -
Cone10ag0655 1517 Coils Coil 901 935 - -
Cone10ag0655 1517 Gene3D - 237 295 - -
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 743 772 - -
Cone10ag0655 1517 Pfam DIL domain 1335 1438 IPR002710 -
Cone10ag0655 1517 Gene3D Kinesin motor domain 77 647 IPR036961 -
Cone10ag0655 1517 Pfam Myosin head (motor domain) 78 705 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone10ag0655 1517 Coils Coil 865 896 - -
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 768 797 - -
Cone10ag0655 1517 PANTHER MYOSIN 12 1458 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0009860(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 720 746 - -
Cone10ag0655 1517 CDD MYSc_Myo11 78 705 IPR036018 -
Cone10ag0655 1517 Gene3D Myosin VI head, motor domain, U50 subdomain 297 586 - -
Cone10ag0655 1517 FunFam unconventional myosin-Va 770 818 - -
Cone10ag0655 1517 ProSiteProfiles IQ motif profile. 791 820 - -
Cone10ag0655 1517 FunFam Myosin 2 297 409 - -
Cone10ag0655 1517 Gene3D - 424 608 - -
Cone10ag0655 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 770 868 IPR027417 -
Cone10ag0655 1517 Coils Coil 954 1037 - -
Cone10ag0655 1517 CDD MyosinXI_CBD 1098 1483 IPR037975 GO:0007015(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0655 Cone-Chr10:3164573 Cone4ag0805 Cone-Chr4:5072247 0 dispersed
Cone10ag0655 Cone-Chr10:3164573 Cone17ag0604 Cone-Chr17:3262558 0 wgd
Cone10ag0655 Cone-Chr10:3164573 Cone3ag0684 Cone-Chr3:3484010 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0655 K10357 - mdm:103451047 2630.13