Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0664 ATGTATGATGTCAAACCCCATGTTTTGTTTTCCATTGTTGGGGTGCTTTTGCTCTTGAATGTGCTTGGACCTTCAGGAGCAGGAGCAGCAAAAGCAAATGAACCAAAGCCATTGTTGCTTGGTTGTGGCTCGGAAGATGAAAACGCGGATCAAGACGGGCGAAAATGGGGACCGGACAAAAAATTTGTCTCTTCGAGCAATTCACTATTGGTCAGAGCTCAATTCCAAGACCCCTCTTTAAGCTCTCAAGTCCCATACATGGATGCTAGAATCTTCACATCAGAAGCTACATACGAATTACCTATAGAACGGGGAAAACGTTATTGGCTTAGACTCCATTTTTACCCTTCGGTGTATGGTGCGCATAATGCGGCGGAGGCTTATTTCTCGGTTACTGTAGATAAAAAGCTAACACTAATGAAAAACTTTAGTGCACAACTCACTTGTCAAGCCTTAACACAATCCTACATTGCTAGAGAATTCTCGTTAGCACCTTCCGATTCGGATTCTATAAGTCTCACCTTCAAGCCTGATGTAGGATTCGCTTTCGTCAATGGCATTGAGTTGATTCCTATTCCTGATCTTTTCTCGAATGCCCCAATGGTTGGAAGATCCGATGAAGCAATTGATGCCGGAACTTCAAGTTTACAAACCATGTTTAGATTGAATGTAGGAGGACAGTATATTCCACCCACGAACGATTCCGGTCTTACCCGAACATGGTATGATGACTTGCCTTACATTTACGGAGCTGGAGCCGGGGTCACAAATAAGGCCGATCCAAAGGTTAAAATTGAGTACAAAGATCTTCCTCAATATGCTGCTCCTGTTGATGTTTACAGCACTTCGAGGTCAATGGGAAATGACAAGAATGTTAACCTAGGTTACAATCTTACATGGGTGTTTCAACAAGTCGATGCGAATTTCACTTACATAGTGAGGTTACATTTTTGTGATTACTTCTTGACCAAGACCAATCAGATTGTTTTTAGCATCTACATCAATAATCAGACGGCTGTGGAAACTGCAGATGTGATCGGATGGACAGGAGGGCAAGGGATCCCGACATATCAAGATTACGCAATATTTATCGGCGACGGGCCCGGTGACGAGCAGCTTTGGCTCGCATTGCATCCTTCGGACGAGATGAAGCCGGAGTTCATGGATGCATTGCTGAATGGGGTTGAGGTTTTCAAGCTTGCTTCTGGTGACAACTTGGCTGGACCAAACCCTGCTCCCTCAGATTTTCAAGTCAAGGTTGATTCTCAAGCTCCTAAGACCTTTGCGAAACCGAAAACGAGCTACACAAAGCAAGTCATTGGTGGAGTGTCTGGCGGAGCTGCCGCTTTTGTAGTGGCGGTAGTTTGCATTTTCGCCGTCTATCATAGAAAGAAGAGAGTGGCCGGAACAGATTCACACACTTCTAGCTGGTTACCGCTCTACGGAAACTCACATTCGAGCGGTGGAAAATCGACTAATTCAGGCCGAAGCACAGCTACCGCGTTGGCTCAGGGTCTGGCTCGGCATTTCTCTCTATCCGAGATTGTACAAGCTACGAAGAATTTCGATAAGTCTTATGTGATTGGTGTTGGAGGATTTGGGAAGGTCTATAAGGGAGTTATTGATGGAGGGGTGAAAGTAGCCATTAAGAGATCGAACCCTTCTTCCGAGCAAGGAGTTCATGAGTTCCTTACAGAAATCGATTTGTTGTCTAAGCTTAGACACAAACACTTGGTGTCGCTTATAGGCTTTTGCGATGAAGACAATGAGATGTGTTTGGTTTATGACTACATGGGACGTGGGACCCTCCGGGAGCATATTTACAAGTCGAACGAACCATGTTTGTCGTGGAAACAGAGGCTCGAGATTTGCATCGGATCTGCAAGAGGACTTCATTATCTTCACACAGGAGCACAATATACTATTATCCATAGAGATGTGAAAACGACCAACATTCTCTTAGATGACAATTGGGTTGCTAAAGTTTCAGATTTCGGGCTCTCAAAAACTGGGCCGAACATGGCTAATGGCCATGTCAGCACGGTGGTTAAAGGCAGCTTCGGGTACCTAGATCCCGAGTACTTCAAGAGACAACAGTTGACTGAAAAATCTGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTTTATGTGGTAGGCCGGCTCTAAACCCGAGCCTTCCGAAAGAACAAGTCAGTCTTGCAGATTGGGCATTGCATTGCAAAAAGAAAGGGTTTCTTGAAGACATCATTGACCCTCATATCAAGGATAAGATCGATCCAGAATGCTTGAAGAAGTTTGCGGATGCAGCCGAGAAGTGTTTGGATGATCATGGAGCCGAGCGTCCTTCAATGGGCGACGTGTTGTGGACCCTTGAATTTGCTCTTCGGTTGCAGGAAAATATAGAAGAAGGTTCGGGTTCAAGCCATTCTTCTTCCCAACATGACGAATATGTTACTCAAAGAAACCAGACCATTGCAATGCACTATAACAATCTAAGCCTAGGAAGTGAAGCCGATCTAATCAACGAATCTACTGATGTTAACAACAGCACTGAGATTTTTTCGCAGATTGCCCATCCGAAAGGTCGATAA 2595 44.66 MYDVKPHVLFSIVGVLLLLNVLGPSGAGAAKANEPKPLLLGCGSEDENADQDGRKWGPDKKFVSSSNSLLVRAQFQDPSLSSQVPYMDARIFTSEATYELPIERGKRYWLRLHFYPSVYGAHNAAEAYFSVTVDKKLTLMKNFSAQLTCQALTQSYIAREFSLAPSDSDSISLTFKPDVGFAFVNGIELIPIPDLFSNAPMVGRSDEAIDAGTSSLQTMFRLNVGGQYIPPTNDSGLTRTWYDDLPYIYGAGAGVTNKADPKVKIEYKDLPQYAAPVDVYSTSRSMGNDKNVNLGYNLTWVFQQVDANFTYIVRLHFCDYFLTKTNQIVFSIYINNQTAVETADVIGWTGGQGIPTYQDYAIFIGDGPGDEQLWLALHPSDEMKPEFMDALLNGVEVFKLASGDNLAGPNPAPSDFQVKVDSQAPKTFAKPKTSYTKQVIGGVSGGAAAFVVAVVCIFAVYHRKKRVAGTDSHTSSWLPLYGNSHSSGGKSTNSGRSTATALAQGLARHFSLSEIVQATKNFDKSYVIGVGGFGKVYKGVIDGGVKVAIKRSNPSSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDEDNEMCLVYDYMGRGTLREHIYKSNEPCLSWKQRLEICIGSARGLHYLHTGAQYTIIHRDVKTTNILLDDNWVAKVSDFGLSKTGPNMANGHVSTVVKGSFGYLDPEYFKRQQLTEKSDVYSFGVVLFEVLCGRPALNPSLPKEQVSLADWALHCKKKGFLEDIIDPHIKDKIDPECLKKFADAAEKCLDDHGAERPSMGDVLWTLEFALRLQENIEEGSGSSHSSSQHDEYVTQRNQTIAMHYNNLSLGSEADLINESTDVNNSTEIFSQIAHPKGR 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3227902 3230496 - Conep10aG0068100.1 Cone10ag0664 446462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0664 864 PANTHER OS07G0166700 PROTEIN 510 800 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone10ag0664 864 FunFam receptor-like protein kinase FERONIA 484 597 - -
Cone10ag0664 864 Gene3D Phosphorylase Kinase; domain 1 484 597 - -
Cone10ag0664 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0664 864 Pfam Protein tyrosine and serine/threonine kinase 527 789 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0664 864 SUPERFAMILY Protein kinase-like (PK-like) 508 794 IPR011009 -
Cone10ag0664 864 SMART serkin_6 522 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0664 864 FunFam FERONIA receptor-like kinase 37 193 - -
Cone10ag0664 864 ProSiteProfiles Protein kinase domain profile. 522 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0664 864 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524(InterPro)
Cone10ag0664 864 Pfam Malectin-like domain 41 399 IPR024788 -
Cone10ag0664 864 Gene3D - 38 191 - -
Cone10ag0664 864 Gene3D - 215 401 - -
Cone10ag0664 864 Gene3D Transferase(Phosphotransferase) domain 1 598 817 - -
Cone10ag0664 864 CDD STKc_IRAK 528 793 - -
Cone10ag0664 864 FunFam FERONIA receptor-like kinase 214 401 - -
Cone10ag0664 864 FunFam Receptor-like protein kinase FERONIA 598 811 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0664 Cone-Chr10:3227902 Cone19ag1457 Cone-Chr19:9464268 9.83E-297 dispersed
Cone10ag0664 Cone-Chr10:3227902 Cone3ag0691 Cone-Chr3:3533339 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81823 PF13520 AA_permease_2 6.10E-50 CL0062 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0664 - - - 0.0