Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone10ag0678 | ATGGCTCTAAGGCCTAGGTCAACAACATGGATAGCAGCTGCTGCAGTCATGACTGATCATGTTCAAGAACAAGAACATGATCGAGATAAGTACAATAACCTGAAGGGAAAGATTCACAAGAGACGGTGGAGGTTGGCTTTGACGGCTATATGTTTCACTAGGGCTCTGGTTTCTCTATCGAAGAAAGCTCTCGAAACCAATGCTCGGGTCTTGCGTTCGCTCTCCTACGTCACCATTGATGTTCAACCTAACGATGATCATAATAACCCAGTAGATCATATCCAACCGACAGAAGAAGCAATACTTTTTCTTGATGTTGATCGGCAAATATTAAGCACCATGGTGAGGGAGAAGAACTCTGGAACTTTGACTCAATTGGGAGGGATTACACAATTAGCAGCACTTCTTCGAACTAACCCAAAAGACGGTATAACCGGGACCGAGGCAGATGTTCTTAACCGAAAAACCATTTTTGGTTCAAACACATATCCAAAACCACCCCTCAAAACCTTTTTCAGCTTTGTTCTCGAATCATTTAAAGACCTTACTATCATCATACTCTTAATATGTGCAATCCTCTCTCTCGTTTTCGGAATCAAACAACGCGGTTGGAGTTGCGGATGGTACGATGGTGGAAGCATCATTTTCGCCATTTTACTTGTAGTTATAGTCTCTTCTTTGAGCAACTTCAAGCAATCTAAACAGTTTCAGAAACTATCAGCCAAAAGTAGCGACATAAAAATCGACGTAGTAAGAGCCGGAAGAAGACAACCCGTTTCAATTTTTGAGGTTTGTGTGGGTGATATAGTTTGTTTGAAGATCGGGGACCAGATTCCGGCAGATGGGTTGTTCTTGGATGGCCACTCGCTCAAAGTTGACGAATCAAGCATGACTGGAGAGAGTGAACACATAGAAGCGAATATAAATAGTCCGTTTATGTTGTCGGGCACAAAAGTGACGGATGGGTTTGGCATAATGATGGTGACTTCTGTGGGGCCTGCTACGCTATGGGGTGAGATGATGAGTTCGATAAGCCGAGAAATAGACGAGCAAACCCCATTACAAGCCCGTTTGAACAAGATAACGTCGTATATCGGGAAAGTCGGATTAACCATTGCAATACTCGTTCTTGCAGTCTTGATGATCCGTTATTTTACAGGAAATACTAAAAATTTTAGAGGGCAAAGAGAATTTAATGGAAGTAAGACAAAATTCAATGACGTGATGAATTCAGTGGTGGATATGGTGGCAGCCGCTGTTACGATCGTTGTGGTGGCAATCCCGGAAGGGTTGCCTTTGGCCGTTACTTTGACTCTTGCTTTCTCGATGAAGAAAATGATGGGCGATAATGCAATGGTTAGAAAGCTCTCGGCTTGTGAGACTATGGGGTCCGCCACGACGATTTGCACAGATAAAACAGGTACTCTTACTTTAAACGAAATGCAAGTTACAGAGTTTTGGCTCGGAAAAGAAAGAATAACGAAAGAAGTCAACTTATCAAATGCAACCTCCTTTGTTCTCAATCTGTTACAAGACACAGTTGGTTTAAACACTTCAGGTAATGTTTATAAGCCAGCTTCTACGTTGGTTCCTGAAGTTTCTGGTAGTCCAACAGAGAAGGCGATACTTTCTTGGGCTATCTTCGAATTAGACATGGATATCGATGAAGTAAAGAAGCGTAATGAGATAATACAAGTGGAGACCTTCAATTCGGAGAAAAAAAGAAGTGCGGTTTTGACAAAGAGGAAAAGTGATGAGACGGGCCTTCTTCAAACCCATTGGAAAGGAGCAGCCGAAATGATTTTGAGCATGTGTTCAAGTTATTACGATATCTCTGGAAATATCACATCCATGGATGATGCAGAAAGAAGGCAAATCAGTACCATAATCTCAAACATGGCTGCAAAAAGCTTACGGTGTATAGCATTCGCTCACAAAAAAGTTGACCACAAGCTCGAAGAATCAGACCTTACATGGTTAGGGCTGGTTGGTTTAAAAGACCCATGTCGGCCTGGAGTCAGAGCTGCTGTCGAATCTTGCCAAGCTGCTGGTGTCAACGTAAAAATGATAACAGGCGATAATGTTCTCACTGCAAAGGCTATAGCCATTGAATGTGGGATACTAAACCCAGATGAGGATTTAGACGAGGAAGCTATTGTAGAGGGTGTTCAGTTTAGAAACTTCTCTCCAAAGGAGAGAGCCGAAAAGGTCGAGAAGATCAAAGTAATGGCTAGATCCTCTCCGTTCGATAAGCTCGAAATGGTGCAATGCTTGAAGCAGAGAGGCCATGTGGTGGCAGTTACAGGGGACGGCACAAATGATGCTCCAGCTTTAAAAGAAGCCGATATTGGCCTTTCTATGGGGATACAAGGCACAGAAGTGGCGAAGGAGAGCTCAGACATAGTTATCCTGGATGATAACTTTGCTTCGGTTGTGACGGTTTTAAGGTGGGGCCGGTGTGTTTACAACAATATTCAGAAATTCATTCAGTTTCAACTAACTGTAAATGTTTCTGCCCTTATCATCAACTTCATTGCGGCTATTTCCTCCGGAAAAGTCCCTCTAACTGCCGTTCAGTTATTATGGGTCAACCTCATAATGGACACTTTAGGAGCCTTAGCATTAGCAACTGATCAACCTACTAATGATCTTATGGCGAAACCGCCTGTGGGTCGATCAGATCCGTTGATTAGTATGATCATGTGGAGGAATCTGATCGCTCAGGCATTGTACCAGGTGATTATCTTGCTAACTCTAGAGTTTAAAGGAAGATCGATTTTTAATGTGGGTGAAAAGGTGAAGAACACTATTATTTTCAACACCTTTGTGTTCTGTCAAATCTTCAATGAGTTCAACGCAAGGAAGCTAGAGAAGAAGAATGTGTTTGAAGGGTTGACGAAAAACAAGCTCTTTATAGGGATAATAGGGATTACCGTGGTTTTTCAGCTGGTCATGGTGGAGTTTCTGAAGAAGTTCGCGGATACTAAGAGGCTCGACTGGGGACAATGGGGGGCTTGCATTGGCATTGCCGCTTTGTCTTGGCCAATTGGATGGATTGTTAAGTGCATTCCGGTTTCAAGTAAATATTCATTCGGAACAAAGAAATGA | 3108 | 42.7 | MALRPRSTTWIAAAAVMTDHVQEQEHDRDKYNNLKGKIHKRRWRLALTAICFTRALVSLSKKALETNARVLRSLSYVTIDVQPNDDHNNPVDHIQPTEEAILFLDVDRQILSTMVREKNSGTLTQLGGITQLAALLRTNPKDGITGTEADVLNRKTIFGSNTYPKPPLKTFFSFVLESFKDLTIIILLICAILSLVFGIKQRGWSCGWYDGGSIIFAILLVVIVSSLSNFKQSKQFQKLSAKSSDIKIDVVRAGRRQPVSIFEVCVGDIVCLKIGDQIPADGLFLDGHSLKVDESSMTGESEHIEANINSPFMLSGTKVTDGFGIMMVTSVGPATLWGEMMSSISREIDEQTPLQARLNKITSYIGKVGLTIAILVLAVLMIRYFTGNTKNFRGQREFNGSKTKFNDVMNSVVDMVAAAVTIVVVAIPEGLPLAVTLTLAFSMKKMMGDNAMVRKLSACETMGSATTICTDKTGTLTLNEMQVTEFWLGKERITKEVNLSNATSFVLNLLQDTVGLNTSGNVYKPASTLVPEVSGSPTEKAILSWAIFELDMDIDEVKKRNEIIQVETFNSEKKRSAVLTKRKSDETGLLQTHWKGAAEMILSMCSSYYDISGNITSMDDAERRQISTIISNMAAKSLRCIAFAHKKVDHKLEESDLTWLGLVGLKDPCRPGVRAAVESCQAAGVNVKMITGDNVLTAKAIAIECGILNPDEDLDEEAIVEGVQFRNFSPKERAEKVEKIKVMARSSPFDKLEMVQCLKQRGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVSALIINFIAAISSGKVPLTAVQLLWVNLIMDTLGALALATDQPTNDLMAKPPVGRSDPLISMIMWRNLIAQALYQVIILLTLEFKGRSIFNVGEKVKNTIIFNTFVFCQIFNEFNARKLEKKNVFEGLTKNKLFIGIIGITVVFQLVMVEFLKKFADTKRLDWGQWGACIGIAALSWPIGWIVKCIPVSSKYSFGTKK | 1035 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3288120 | 3291503 | + | Conep10aG0069500.1 | Cone10ag0678 | 446476 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone10ag0678 | 1035 | SMART | Cation_ATPase_N_a_2 | 125 | 199 | IPR004014 | - | |
| Cone10ag0678 | 1035 | FunFam | Calcium-transporting ATPase | 223 | 345 | - | - | |
| Cone10ag0678 | 1035 | FunFam | Calcium-transporting ATPase | 663 | 813 | - | - | |
| Cone10ag0678 | 1035 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 118 | 1025 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone10ag0678 | 1035 | SUPERFAMILY | Calcium ATPase, transduction domain A | 247 | 343 | IPR008250 | - | |
| Cone10ag0678 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 738 | 850 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0678 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 411 | 495 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0678 | 1035 | Gene3D | - | 148 | 345 | - | - | |
| Cone10ag0678 | 1035 | FunFam | Calcium-transporting ATPase | 785 | 1027 | - | - | |
| Cone10ag0678 | 1035 | PANTHER | CATION TRANSPORTING ATPASE | 93 | 1026 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone10ag0678 | 1035 | Pfam | Cation transporter/ATPase, N-terminus | 127 | 194 | IPR004014 | - | |
| Cone10ag0678 | 1035 | SUPERFAMILY | HAD-like | 467 | 873 | IPR036412 | - | |
| Cone10ag0678 | 1035 | Gene3D | - | 177 | 1022 | - | - | |
| Cone10ag0678 | 1035 | Gene3D | - | 466 | 813 | IPR023214 | - | |
| Cone10ag0678 | 1035 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 471 | 477 | IPR018303 | - | |
| Cone10ag0678 | 1035 | Pfam | haloacid dehalogenase-like hydrolase | 467 | 782 | - | - | |
| Cone10ag0678 | 1035 | Pfam | E1-E2 ATPase | 245 | 447 | - | - | |
| Cone10ag0678 | 1035 | SFLD | p-type atpase | 451 | 821 | IPR044492 | - | |
| Cone10ag0678 | 1035 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 127 | 1025 | IPR023298 | - | |
| Cone10ag0678 | 1035 | Gene3D | - | 479 | 668 | IPR023299 | GO:0000166(InterPro) | |
| Cone10ag0678 | 1035 | Pfam | Cation transporting ATPase, C-terminus | 853 | 1022 | IPR006068 | - | |
| Cone10ag0678 | 1035 | SFLD | C1.7: P-type atpase like | 451 | 821 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 768 | 784 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0678 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 800 | 825 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0678 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 626 | 644 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 661 | 672 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 293 | 307 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 683 | 693 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 768 | 787 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 792 | 804 | - | - | |
| Cone10ag0678 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 469 | 483 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0678 | Cone-Chr10:3288120 | Cone17ag0021 | Cone-Chr17:157509 | 0 | dispersed | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone17ag0579 | Cone-Chr17:3019882 | 0 | wgd | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone20ag0829 | Cone-Chr20:5887976 | 1.07E-194 | wgd | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone3ag0703 | Cone-Chr3:3598745 | 2.91E-135 | wgd | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone4ag0278 | Cone-Chr4:1262302 | 0 | wgd | |
| Cone10ag0678 | Cone-Chr10:3288120 | Cone7ag0285 | Cone-Chr7:1209868 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone10ag0678 | K01537 | - | mdm:103451029 | 1415.98 |