Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0695 ATGTTCTTCGTCTTCTGGTACTATTTCTACGAGTACAATGAAATCCTTGGAAAAGGAGCTTCCAAGACAGTGTACAGAGCATTTGATGAATACGAAGGAATAGAAGTTGCCTGGAATCAGGTCAAGCTTTCTGAATTTTTCCAAAGCCCTCAACATCTTGACAAAGTCAACTCAGAAATCCATCTTCTAAAGACACTAAACCATAACAGCATCATCAAGTTCCATACTTCTTGGATTGATTCTTCAAACAGGAACATCAACTTTGTCACTGAAATGTTCACTTCTGGCACTTTAAGACAGTATAGGCTGAAGCACAAAAGGGTTAATGTTAGGGCAGTGAAAATTTGGTGTAGACAAATATTGAGAGGACTTGTCTATTTGCATGGCCATGACCCTCCTGTGATTCATAGAGACCTCAAGTTCAACATCTTTGTTAATGGCAACCTTGGTGAAGTTAAGATTGGAGACCTCGGCCTCGCATCGGTCCTCTTCAAATCACATGCCACATCCTGTGTCGGAACACCAGAATTCATGGCCCCTGAAATGTATCGAGAATCATACAATGAATTGGGTAAAAAACCAGAGGCCTTATACAGAGTAAACATTCTAGAAGTGCGAAAATTCATCGAGAAATGCTTGGTCAACGTGTCTTTCAGGCCATCAGCAAGAGAGCTCTTGGATGACCCTTTTCTGCAACTTGATGATGAAATGGAAACTTGTGGAATTGAACTTTTTGAGGACAATGAAGCTGAGGATCTAGAAGATTGTGAAATAGGCATTGAAGGCAAGATGAGAGAAAATGGTCACATCTTTATGAGACTCAGAATTGCAGATAAACAAGGTGGTTTTCGGAACATTTATTTCCCGTTTGAACCAGAAGTGGACACGGCATTTACAGTTGCAACTGAAATGATCACGGAGCTCGATATAACAGACCAAGACGTGACCAGAATAGCTGACATGATTGATACAGAAATTGCTTTCTTGCTACCCGAGTGGAGCCCGGGCCTTGACCTAACAGACCAAAGTTATCGACCGAGCTGTGCTTCTAACCGTAAATCCAGTTGTTCTAACACAAACCAAAATTGTAGACATCAGAGTGCTTCAATGCACGGTCGATTCAATGAGATTATGTCAGAAGCCAAGGAGTATCACCGGGGTAATTCATTGAGCTCAGGACAGAGCCTTTCGGACAAAGAACTTGAAGAGAAAATGAATCGAAGATTGTTGAAAAACAAAGTTGGTCCTGATCAGAATAGTTCTCCGGGAAACTTATCGGATCCTCTCTCTTTTGCTGCAATCCCTTCATTGTATCTTAGCTGGAGATGA 1329 41.46 MFFVFWYYFYEYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLSEFFQSPQHLDKVNSEIHLLKTLNHNSIIKFHTSWIDSSNRNINFVTEMFTSGTLRQYRLKHKRVNVRAVKIWCRQILRGLVYLHGHDPPVIHRDLKFNIFVNGNLGEVKIGDLGLASVLFKSHATSCVGTPEFMAPEMYRESYNELGKKPEALYRVNILEVRKFIEKCLVNVSFRPSARELLDDPFLQLDDEMETCGIELFEDNEAEDLEDCEIGIEGKMRENGHIFMRLRIADKQGGFRNIYFPFEPEVDTAFTVATEMITELDITDQDVTRIADMIDTEIAFLLPEWSPGLDLTDQSYRPSCASNRKSSCSNTNQNCRHQSASMHGRFNEIMSEAKEYHRGNSLSSGQSLSDKELEEKMNRRLLKNKVGPDQNSSPGNLSDPLSFAAIPSLYLSWR 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3509380 3511544 + Conep10aG0071500.1 Cone10ag0695 446493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0695 442 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 190 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone10ag0695 442 Gene3D Phosphorylase Kinase; domain 1 7 91 - -
Cone10ag0695 442 MobiDBLite consensus disorder prediction 348 368 - -
Cone10ag0695 442 Pfam Protein kinase domain 10 188 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0695 442 SUPERFAMILY Protein kinase-like (PK-like) 10 232 IPR011009 -
Cone10ag0695 442 ProSiteProfiles Protein kinase domain profile. 10 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0695 442 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 272 326 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cone10ag0695 442 Gene3D Transferase(Phosphotransferase) domain 1 93 193 - -
Cone10ag0695 442 FunFam Probable serine/threonine-protein kinase WNK1 7 91 - -
Cone10ag0695 442 Gene3D - 268 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0695 Cone-Chr10:3509380 Cone16ag0070 Cone-Chr16:356792 2.90E-114 dispersed
Cone1ag1727 Cone-Chr1:58069521 Cone10ag0695 Cone-Chr10:3509380 5.49E-154 wgd
Cone10ag0695 Cone-Chr10:3509380 Cone3ag0714 Cone-Chr3:3663301 1.94E-262 wgd
Cone10ag0695 Cone-Chr10:3509380 Cone4ag0242 Cone-Chr4:1093750 2.94E-119 wgd
Cone10ag0695 Cone-Chr10:3509380 Cone5ag0535 Cone-Chr5:2272794 2.74E-151 wgd
Cone10ag0695 Cone-Chr10:3509380 Cone7ag0248 Cone-Chr7:1045463 4.77E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81825 PF00847 AP2 6.40E-14 CL0081 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0695 K08867 - gmx:100775959 489.96