Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone10ag0698 | ATGGCTGGTTTGGAAGAATTGAAGAAGAAGCTTGCCCCGTTGGGAATTGCAGTGGAACCAACTCTAGACCCTAATGATTCCTGCACATTTTCGAATGGAGGGACTGTTAATCTGTTGAGTAGATCTTATGGAGTGTATAATATTAATGAGCTTGGATTGCAAAAGTGTACATCTTGGCCGGCGGAAAATGATTCGGAATCTAGTGAGAAGACTTACCGATGTGGTTCGAGCGAGATGAGGATATTTGGAGCTATAGGCTGTGGAGCCAGCAGTATTGTTCAGAGAGCTATTCATATTCCCACTCATAGAATTTTGGCATTGAAGAAGATCAATATCTTTGAAAAGGAGAAAAGGCAACAGCTTCTTACAGAGATAAGGACCTTGTGTGAATCACCTTGTTACGAGGGTCTTGTAGAATTCCACGGGGCATTTTATACACCCGACTCTGGTCAAATAAGCATAGCCTTAGAATACATGGATGGAGGGTCTTTAGCAGATATTTTACACTTGAAGAAATGTTTACCCGAGCACGTCCTTTCATCAATGTTCCAGAAGCTTCTCCGTGGACTAAGCTACTTGCATGGAGTTAGACATTTAGTTCATAGAGATATAAAGCCCGCAAATTTACTCGTCAATCTCAAGGGTGAGCCAAAAATAACGGATTTCGGTATAAGTGCTGGCTTAGAGAATTCTATGGCAATGTGTGCTACTTTTGTTGGAACGGTTACATATATGTCACCCGAGCGAATTAGAAACGAAAATTACTCATATCCGGCCGATATATGGAGCCTTGGACTTGCTCTCTTCGAGTGTGGTACTGGAGAATTCCCATATTCTGCCATTGACGGTCCTGTGAATCTTATGTTACAGATTCTGGATGATCCATCTCCGTCACCACCAAAACAAAAATTCTCACCAGAATTCTGCTCGTTTATTGATGTCTGCTTGCAAAAGGATCCAGATTCTAGGCCAACAGCAGATCAACTACTTTCACACCCGTTTATCACAAGGTATGAGGATGCACGAGTAGACTTGGAATCATTTGTTCGAGAAGTATTCGACCCAACACAACGGATGAAGGAGTTGGCAGATATGCTTACAATTCATTATTACTTACTCATGGACGGTCCAGATGAATTCTGGCAGCACATGAAGGGCTTGTACAACGGAAGTTCAACTTTGAGTTTCTCAGGGAAGCAATTTATGGGTCCAAGCGAAATATTCAAGACTCTAACAAACATACGGAGTACACTAGCCGGAGAGTGGCCGCCCGAAAAATTAGTCCATGTTGTGGAGAAACTTCAATGCCGGGCCCATGGTCTGGAAGGAATTGCGATCAGGGTTTGGGGATCTTTCATAATAGGGAACCAGTTCCTTATATGTGGAGATGGATTACAAGTCGAGGGAATTCCAAATTTTAAGGATCTTGCTATCAATGTTTCGAGCAAGAGAATGGGAACGTTTCGAGAACAGTTTGTCATGGAGCCGAGTAATGTTATTGGTTGCTACGAAATAACAAAACAAGAGCTTTACATAACACAAGTAGAGAACTAG | 1554 | 42.28 | MAGLEELKKKLAPLGIAVEPTLDPNDSCTFSNGGTVNLLSRSYGVYNINELGLQKCTSWPAENDSESSEKTYRCGSSEMRIFGAIGCGASSIVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCESPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILHLKKCLPEHVLSSMFQKLLRGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYSAIDGPVNLMLQILDDPSPSPPKQKFSPEFCSFIDVCLQKDPDSRPTADQLLSHPFITRYEDARVDLESFVREVFDPTQRMKELADMLTIHYYLLMDGPDEFWQHMKGLYNGSSTLSFSGKQFMGPSEIFKTLTNIRSTLAGEWPPEKLVHVVEKLQCRAHGLEGIAIRVWGSFIIGNQFLICGDGLQVEGIPNFKDLAINVSSKRMGTFREQFVMEPSNVIGCYEITKQELYITQVEN | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3519546 | 3522812 | - | Conep10aG0071800.1 | Cone10ag0698 | 446496 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone10ag0698 | 517 | SMART | serkin_6 | 79 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0698 | 517 | ProSiteProfiles | Protein kinase domain profile. | 79 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0698 | 517 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 355 | IPR011009 | - | |
Cone10ag0698 | 517 | SUPERFAMILY | NTF2-like | 360 | 511 | IPR032710 | - | |
Cone10ag0698 | 517 | Pfam | Protein kinase domain | 83 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone10ag0698 | 517 | FunFam | mitogen-activated protein kinase kinase 3 | 161 | 357 | - | - | |
Cone10ag0698 | 517 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 360 | - | - | |
Cone10ag0698 | 517 | FunFam | mitogen-activated protein kinase kinase 3 | 51 | 160 | - | - | |
Cone10ag0698 | 517 | CDD | PKc_MAPKK_plant_like | 77 | 339 | - | - | |
Cone10ag0698 | 517 | FunFam | Mitogen-activated protein kinase kinase 3 | 359 | 513 | - | - | |
Cone10ag0698 | 517 | Gene3D | - | 361 | 512 | - | - | |
Cone10ag0698 | 517 | ProSitePatterns | Protein kinases ATP-binding region signature. | 85 | 108 | IPR017441 | GO:0005524(InterPro) | |
Cone10ag0698 | 517 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 199 | 211 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone10ag0698 | 517 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 61 | 367 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cone10ag0698 | 517 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 362 | 512 | IPR018222 | - | |
Cone10ag0698 | 517 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 160 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0698 | Cone-Chr10:3519546 | Cone7ag0046 | Cone-Chr7:199505 | 8.85E-75 | dispersed | |
Cone10ag0698 | Cone-Chr10:3519546 | Cone3ag0716 | Cone-Chr3:3670629 | 0 | wgd | |
Cone10ag0698 | Cone-Chr10:3519546 | Cone4ag0218 | Cone-Chr4:999361 | 3.48E-36 | wgd | |
Cone10ag0698 | Cone-Chr10:3519546 | Cone7ag0228 | Cone-Chr7:966856 | 1.58E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81826 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone10ag0698 | K20607 | - | gmx:100784935 | 852.818 |