Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0698 ATGGCTGGTTTGGAAGAATTGAAGAAGAAGCTTGCCCCGTTGGGAATTGCAGTGGAACCAACTCTAGACCCTAATGATTCCTGCACATTTTCGAATGGAGGGACTGTTAATCTGTTGAGTAGATCTTATGGAGTGTATAATATTAATGAGCTTGGATTGCAAAAGTGTACATCTTGGCCGGCGGAAAATGATTCGGAATCTAGTGAGAAGACTTACCGATGTGGTTCGAGCGAGATGAGGATATTTGGAGCTATAGGCTGTGGAGCCAGCAGTATTGTTCAGAGAGCTATTCATATTCCCACTCATAGAATTTTGGCATTGAAGAAGATCAATATCTTTGAAAAGGAGAAAAGGCAACAGCTTCTTACAGAGATAAGGACCTTGTGTGAATCACCTTGTTACGAGGGTCTTGTAGAATTCCACGGGGCATTTTATACACCCGACTCTGGTCAAATAAGCATAGCCTTAGAATACATGGATGGAGGGTCTTTAGCAGATATTTTACACTTGAAGAAATGTTTACCCGAGCACGTCCTTTCATCAATGTTCCAGAAGCTTCTCCGTGGACTAAGCTACTTGCATGGAGTTAGACATTTAGTTCATAGAGATATAAAGCCCGCAAATTTACTCGTCAATCTCAAGGGTGAGCCAAAAATAACGGATTTCGGTATAAGTGCTGGCTTAGAGAATTCTATGGCAATGTGTGCTACTTTTGTTGGAACGGTTACATATATGTCACCCGAGCGAATTAGAAACGAAAATTACTCATATCCGGCCGATATATGGAGCCTTGGACTTGCTCTCTTCGAGTGTGGTACTGGAGAATTCCCATATTCTGCCATTGACGGTCCTGTGAATCTTATGTTACAGATTCTGGATGATCCATCTCCGTCACCACCAAAACAAAAATTCTCACCAGAATTCTGCTCGTTTATTGATGTCTGCTTGCAAAAGGATCCAGATTCTAGGCCAACAGCAGATCAACTACTTTCACACCCGTTTATCACAAGGTATGAGGATGCACGAGTAGACTTGGAATCATTTGTTCGAGAAGTATTCGACCCAACACAACGGATGAAGGAGTTGGCAGATATGCTTACAATTCATTATTACTTACTCATGGACGGTCCAGATGAATTCTGGCAGCACATGAAGGGCTTGTACAACGGAAGTTCAACTTTGAGTTTCTCAGGGAAGCAATTTATGGGTCCAAGCGAAATATTCAAGACTCTAACAAACATACGGAGTACACTAGCCGGAGAGTGGCCGCCCGAAAAATTAGTCCATGTTGTGGAGAAACTTCAATGCCGGGCCCATGGTCTGGAAGGAATTGCGATCAGGGTTTGGGGATCTTTCATAATAGGGAACCAGTTCCTTATATGTGGAGATGGATTACAAGTCGAGGGAATTCCAAATTTTAAGGATCTTGCTATCAATGTTTCGAGCAAGAGAATGGGAACGTTTCGAGAACAGTTTGTCATGGAGCCGAGTAATGTTATTGGTTGCTACGAAATAACAAAACAAGAGCTTTACATAACACAAGTAGAGAACTAG 1554 42.28 MAGLEELKKKLAPLGIAVEPTLDPNDSCTFSNGGTVNLLSRSYGVYNINELGLQKCTSWPAENDSESSEKTYRCGSSEMRIFGAIGCGASSIVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCESPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILHLKKCLPEHVLSSMFQKLLRGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYSAIDGPVNLMLQILDDPSPSPPKQKFSPEFCSFIDVCLQKDPDSRPTADQLLSHPFITRYEDARVDLESFVREVFDPTQRMKELADMLTIHYYLLMDGPDEFWQHMKGLYNGSSTLSFSGKQFMGPSEIFKTLTNIRSTLAGEWPPEKLVHVVEKLQCRAHGLEGIAIRVWGSFIIGNQFLICGDGLQVEGIPNFKDLAINVSSKRMGTFREQFVMEPSNVIGCYEITKQELYITQVEN 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3519546 3522812 - Conep10aG0071800.1 Cone10ag0698 446496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0698 517 SMART serkin_6 79 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0698 517 ProSiteProfiles Protein kinase domain profile. 79 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0698 517 SUPERFAMILY Protein kinase-like (PK-like) 81 355 IPR011009 -
Cone10ag0698 517 SUPERFAMILY NTF2-like 360 511 IPR032710 -
Cone10ag0698 517 Pfam Protein kinase domain 83 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0698 517 FunFam mitogen-activated protein kinase kinase 3 161 357 - -
Cone10ag0698 517 Gene3D Transferase(Phosphotransferase) domain 1 161 360 - -
Cone10ag0698 517 FunFam mitogen-activated protein kinase kinase 3 51 160 - -
Cone10ag0698 517 CDD PKc_MAPKK_plant_like 77 339 - -
Cone10ag0698 517 FunFam Mitogen-activated protein kinase kinase 3 359 513 - -
Cone10ag0698 517 Gene3D - 361 512 - -
Cone10ag0698 517 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524(InterPro)
Cone10ag0698 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0698 517 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 61 367 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone10ag0698 517 ProSiteProfiles Nuclear transport factor 2 domain profile. 362 512 IPR018222 -
Cone10ag0698 517 Gene3D Phosphorylase Kinase; domain 1 48 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0698 Cone-Chr10:3519546 Cone7ag0046 Cone-Chr7:199505 8.85E-75 dispersed
Cone10ag0698 Cone-Chr10:3519546 Cone3ag0716 Cone-Chr3:3670629 0 wgd
Cone10ag0698 Cone-Chr10:3519546 Cone4ag0218 Cone-Chr4:999361 3.48E-36 wgd
Cone10ag0698 Cone-Chr10:3519546 Cone7ag0228 Cone-Chr7:966856 1.58E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81826 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0698 K20607 - gmx:100784935 852.818