Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone10ag0711 | ATGGGTGCACAGAAAAAGGGTGCATCTAAGGGTTCAGATGACCCTGAGGAGTTGGCGCGCGTTCCCTTACAGGCAGTTCTTCTTGCTGATAGCTTTGCAACCAAGTTCCGCCCCATCACTCTCGAACGGCCTAAGGTGTTACTACCATTGGTGAATGTCCCGATGATAGATTACACCTTAGCATGGCTCGAATCAGCGGGTGTTGAAGAGGTTTTTGTGTTTTGCTGCGCACATTCAAAGCAAGTCATCAATTATCTGGAAAGCTCTGAATGGCTCTCTCAACCGGACTTCTCCGTCACGACTATAGAATCACACAATTCTGTTAGTGCAGGAGATGCGCTGCGATTAATCTACGAACGAAATGTGATACATGGGGATTTCGTTCTTATTACTGGTGATACTGTAAGCAACATGTCCCTTACTAAAGCTCTTCAAGAACATAAGGAGAGAAGGAAGCGAGATAGTAATGCTATAATGACAATGGTGATTCAGCGTTCAAAGCCTTCTCCTATCACGCACCAATCTAGACTTGGTACAGATGAGCTGTTTATGGCAATAGATCCTAATACTAAGCAACTCTTATATTATGAGGATAGGGCGGGCCATTCAAAAGAGGCTATTTATCTTGATAAGTCATTGCTTATGGAGAATTCTTCCATCTCTCTTCATAACGACAAGCAGGATTGCTATATAGACATCTGCTCCCCAGAAGTACTCAGCCTTTTCACTGACAATTTTGACTATCAACATCTACGTCGACATTTCATCAAGGGATTGCTTGTTGATGATATTATGGGTTACAAGATATTCACACATGAAATCCACTCTAGCTATGCCGCCAGAATTGACAATTTTCGAAGCTATGACACTGTTAGTAAGGACATAATACAACGGTGGACATATCCATTTGTACCGGATGTCATGTTATTTGGAAATTCTGCGACTAGACTCGAAAGACAGGGGACATATCGAGCATCAGATGTAGGGCAGTCACACTCTGCACAGATTGGCCCTTGTACCGTTATTGGAAACAATACCAAGATTGGGGATAACACCAAAATTTCAAATTCAGTTGTTGGGCAAGGGTGTACTATTGGATCAAATTTATTAATAGAGGGTTCGTACATATGGGATAATGTTATCATTGAAGATGGATGCAAAGTAAGGCATGCAATAGTATGTAATGGAGTGACAATAAAGTCCGGAGCAGAACTAAAACCTGGTGTAGTTTTGTCTTTCAAGGTTGTGACAGGGAACCAATTTATCGTTCCTTCATATTCAAAGGTTTCTTTGTTTCAGCAGCCAATAACGCAAGATAGTGATGAGGAGTTGGAGTATGCAGACAATAGCAGTGGCATTGTTGAAAGTACAATGGCAAACTCTACTGGAGAATTGACATCCCAAGCATCGGAGGCATATGAGCTTGGTACTGGAGGTGCTGGATATGTTTGGTCAATTTACGAAGGAACCCTAGAAGAAGAATGGAGGCATTCAGTGGCACCCATTCCAGCAGATAAACTTGCAGAGTTAATGCGAGCTATGGATGATGAGTTGGAATTAGCTCAAGATGGAAGCACTCTTCCTCCTTCAGGGGAGTTGAAACTTGACTCTAATGATTCAGATGGAGATGATAATGAAGACCAGCGGGATGATTCTGCCTTCTTTGAGAAAGAGGTTGAAGCAACTTTTCTAAGGGCTGCACATGAAAATATTAGTGTGGACCATGTCATCCTAGAAGTAAACTCATTGAGGTTGTCATATAATAAGGTAGCTGCAGACTGTGCTGGGGCAATATTTTATTCAGTGATGAAATTTGCATTGGACAGTCCTCATGGTTCAGCTATTGAGTTGTTTCAAACTGCTACCAGCATAATTACAAAATGGAAAAAGCTTCTAAAGCACTACCTTTCTGATGTGGATGACGAGATTGACGTAATACTGAAATTTGAAGAGATGTGCCTGGAATCTGCAAAGGAATTTTCCCCACTTTTTACAAAGATTCTGTGCCATCTGTACGACCAAGAAATCCTTCAGGAAGATGCTGTTTTAAGGTGGGATGATGAGAGGAAAGATGCAGATGAATCAGATAAAGTCTTTGTCGAGCAGTCTGAGAGTTTCATTCAATGGTTGAGAGAGGCATCCGAAGAAGAAGATGACGAAGACTAG | 2166 | 41.78 | MGAQKKGASKGSDDPEELARVPLQAVLLADSFATKFRPITLERPKVLLPLVNVPMIDYTLAWLESAGVEEVFVFCCAHSKQVINYLESSEWLSQPDFSVTTIESHNSVSAGDALRLIYERNVIHGDFVLITGDTVSNMSLTKALQEHKERRKRDSNAIMTMVIQRSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDRAGHSKEAIYLDKSLLMENSSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFIKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIQRWTYPFVPDVMLFGNSATRLERQGTYRASDVGQSHSAQIGPCTVIGNNTKIGDNTKISNSVVGQGCTIGSNLLIEGSYIWDNVIIEDGCKVRHAIVCNGVTIKSGAELKPGVVLSFKVVTGNQFIVPSYSKVSLFQQPITQDSDEELEYADNSSGIVESTMANSTGELTSQASEAYELGTGGAGYVWSIYEGTLEEEWRHSVAPIPADKLAELMRAMDDELELAQDGSTLPPSGELKLDSNDSDGDDNEDQRDDSAFFEKEVEATFLRAAHENISVDHVILEVNSLRLSYNKVAADCAGAIFYSVMKFALDSPHGSAIELFQTATSIITKWKKLLKHYLSDVDDEIDVILKFEEMCLESAKEFSPLFTKILCHLYDQEILQEDAVLRWDDERKDADESDKVFVEQSESFIQWLREASEEEDDED | 721 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3588012 | 3594435 | - | Conep10aG0073300.1 | Cone10ag0711 | 446509 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone10ag0711 | 721 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 13 | 304 | IPR029044 | - | |
| Cone10ag0711 | 721 | CDD | LbH_eIF2B_epsilon | 341 | 418 | - | - | |
| Cone10ag0711 | 721 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON | 10 | 721 | IPR051956 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER) | |
| Cone10ag0711 | 721 | FunFam | Translation initiation factor eIF-2B epsilon subunit | 545 | 721 | - | - | |
| Cone10ag0711 | 721 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 21 | 368 | IPR029044 | - | |
| Cone10ag0711 | 721 | Gene3D | - | 542 | 721 | - | - | |
| Cone10ag0711 | 721 | ProSiteProfiles | W2 domain profile. | 545 | 720 | IPR003307 | GO:0005515(InterPro) | |
| Cone10ag0711 | 721 | FunFam | Translation initiation factor eIF-2B subunit epsilon | 12 | 303 | - | - | |
| Cone10ag0711 | 721 | Pfam | Nucleotidyl transferase | 25 | 162 | IPR005835 | GO:0009058(InterPro) | |
| Cone10ag0711 | 721 | FunFam | Trimeric LpxA-like enzyme | 316 | 449 | - | - | |
| Cone10ag0711 | 721 | SUPERFAMILY | Trimeric LpxA-like enzymes | 268 | 429 | IPR011004 | - | |
| Cone10ag0711 | 721 | SUPERFAMILY | ARM repeat | 555 | 713 | IPR016024 | - | |
| Cone10ag0711 | 721 | MobiDBLite | consensus disorder prediction | 522 | 549 | - | - | |
| Cone10ag0711 | 721 | CDD | W2_eIF2B_epsilon | 550 | 714 | IPR044123 | GO:0005085(InterPro)|GO:0031369(InterPro) | |
| Cone10ag0711 | 721 | Gene3D | Hexapeptide repeat proteins | 317 | 435 | - | - | |
| Cone10ag0711 | 721 | CDD | eIF-2B_epsilon_N | 23 | 239 | IPR035543 | - | |
| Cone10ag0711 | 721 | SMART | 542_3 | 629 | 716 | IPR003307 | GO:0005515(InterPro) | |
| Cone10ag0711 | 721 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 641 | 720 | IPR003307 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0711 | Cone-Chr10:3588012 | Cone3ag0730 | Cone-Chr3:3746210 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone10ag0711 | K03240 | - | csv:101217025 | 1134.01 |