Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone10ag0726 | ATGGAGGTGTCTGAAATCATGTCAGTCCAATCACCTGTTCATGGACTTTCAAATTCATTTCTAAACACGAGCACCATTATTGCTCTCACCGTCTTCTTCGCCCTCCTCTGTGCTTGCATCGTAATCGGTCATTTGCTCGAAGAGCACCGTTGGGCTAATGAATCAATCACCGCCCTTCTTTTGGGATTGGTTGCAGGGGTGGTGGTTTTGCTAGTGAGTAAGTTCCAAAGCTCGCAGATTTTAGTGTTTAGTGAAGATCTGTTCTTCCTTTACTTGCTTCCCCCCATCATTTTCAATGCTGGTTTCCAGGTGAAAAAGAAGCAGTTCTTCAAGAATTTCACAACAATCTTACTGTTTGGAGTATTTGGTACAGTGATTTCGTTTTGCCTCATATCGCTAGGTGCCTTTTTGCTGTTTAAAAGAGTTGGTGTCACCACTCTGGGTATTCAAGATTATCTAGCTGTTGGTGCAATATTATCTGCAACTGATTCGGTTTGTACATTGCAGGTTCTGAATCAAGATGATACACCATTTCTATACAGTGCTGTGTTTGGAGAGGGAGTAGTGAATGATGCTACCTCCATTGTGCTTTTCAATGCAGTACAATCACTTGATACTAGTGATATCAATGCTACCATTGCCTTGCAATTGCTGGGCACTTTTCTTTACCTATTCTTTACCAGTACTGCTCTTGGTATAGTGGTGGGCCTTTTAAGTGCTTTTACTATAAAGACACTATACTTCGGAAGGCACTCTACTGATCGTGAAGTTGCATTAATGATGCTAATGGCTTACTTATCATACATGGTGGCTGAGCTTTTAAACTTAAGTGGAATCTTAACAATTTTCTTCTGTGGCATTGTCATGTCGCATTACACATGGCACAATGTGACGGAAAGCTCGAGAGTAACGACTAAGCATGCATTTGCTACGATTTCGTTCATTGCCGAAACGTTTATATTTCTCTATGTTGGTATGGATGCTTTAGACATAGACAAATGGAAAGAGAGCAAAGCAAGTGCCAGAACTTCAATTGCAGTTAGTTCAACTTTATTCGCTTTAGTATTAATCGGAAGAGCAGCATTTGTTTTCCCAATTTCCAACATCACAAATTGTATGAAGAAAAGAGAGAGCACGAAAATCGAGCTCAAACAACAGTTTATCATATGGTGGGCAGGCCTAATGAGAGGTGCAGTTACTATAGCTCTGTCTTATAACCAATTTGCACATTCGGATGGTTCATCAGAAACTGCTGATGACTGTTTGATGATCACCAGTACAATTATTGTAGTCTTATTTAGTACAGTGGTTTTTGGTTCGATAACAAAGCCATTGATTGCAGCGGTGCTATTAAGGCATGCAAATCCGAACATTTCGGATGCAACGGATATTCCAAGCTTAGAAGACTTGAGGCTCCCATTTCTTGAAGAAGGAGATTCAAGAGAAGATATAGGGAGTAGTGATCAGAAGCAACGCAAACGTAGCCTAAGACTGCTCTTTATGAACCATCCTACTTCAACTGTGCATTACTTTTGGAGGAAATTTGATGATAAGTTTATGAGACCTATGTTTGGTGGCCGGGGTTTTGTCCCCTTTGTTCCCGGTTCGCCAACTGGTGCCGCAGATGAACAACATACTTCTTGA | 1644 | 40.94 | MEVSEIMSVQSPVHGLSNSFLNTSTIIALTVFFALLCACIVIGHLLEEHRWANESITALLLGLVAGVVVLLVSKFQSSQILVFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVFGTVISFCLISLGAFLLFKRVGVTTLGIQDYLAVGAILSATDSVCTLQVLNQDDTPFLYSAVFGEGVVNDATSIVLFNAVQSLDTSDINATIALQLLGTFLYLFFTSTALGIVVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMVAELLNLSGILTIFFCGIVMSHYTWHNVTESSRVTTKHAFATISFIAETFIFLYVGMDALDIDKWKESKASARTSIAVSSTLFALVLIGRAAFVFPISNITNCMKKRESTKIELKQQFIIWWAGLMRGAVTIALSYNQFAHSDGSSETADDCLMITSTIIVVLFSTVVFGSITKPLIAAVLLRHANPNISDATDIPSLEDLRLPFLEEGDSREDIGSSDQKQRKRSLRLLFMNHPTSTVHYFWRKFDDKFMRPMFGGRGFVPFVPGSPTGAADEQHTS | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3683927 | 3687571 | - | Conep10aG0074800.1 | Cone10ag0726 | 446524 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone10ag0726 | 547 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 29 | 537 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Cone10ag0726 | 547 | NCBIfam | sodium/hydrogen exchanger 3 | 30 | 455 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone10ag0726 | 547 | PRINTS | Na+/H+ exchanger signature | 101 | 115 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone10ag0726 | 547 | PRINTS | Na+/H+ exchanger signature | 116 | 124 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone10ag0726 | 547 | PRINTS | Na+/H+ exchanger signature | 156 | 166 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone10ag0726 | 547 | PRINTS | Na+/H+ exchanger signature | 87 | 98 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone10ag0726 | 547 | Pfam | Sodium/hydrogen exchanger family | 43 | 446 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Cone10ag0726 | 547 | Gene3D | - | 148 | 200 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0726 | Cone-Chr10:3683927 | Cone7ag0181 | Cone-Chr7:761678 | 4.33E-207 | dispersed | |
| Cone10ag0726 | Cone-Chr10:3683927 | Cone1ag1776 | Cone-Chr1:58371527 | 1.56E-224 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone10ag0726 | K14724 | - | vvi:100264772 | 798.505 |