Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0732 ATGCAGGAACTCTTCGGATCAGTTCGCCGATCACTGGTTTTCCGTTCACCTGTCGAGAACGAAGAGTCGCAGTCGCCGCCGTTTGGAGCAGGAGCTCTAGTCGACAAGATTCGCAAATCCAGAGTCTTCTCCAGGTACTCTCCCCCTACTCTGCCTCCAATGCCGAAAGACAACGCGCCTAAGATCCGATGGCGCAAGGGAGAGTTGATCGGTTGCGGCGCCTTCGGACGTGTGTATATGGGTATGAATCTTGATTCCGGAGAGCTTCTCGCTGTTAAACAGGTTCTGATCGCATCAAATGGAGGGTCAAATGAGAAAGCACAGGCTCATATCAAGGAGCTTGAGGAAGAGGTGAAACTTCTCAAGGATCTATCTCATCCAAACATTGTTAGATATTTGGGTACAGTGAGGGAAGAAGATTCATTAAATATCTTGTTAGAATTTGTTCCTGGTGGATCCATATCATCACTGTTAGGGAAATTTGGAGCTTTCCCTGAAGCTGTTATAAGGACGTATACAATGCAGTTGTTGTTGGGTTTGGAATATTTACACAAAAATGGTATCATGCACAGGGACATTAAGGGGGCAAATATTCTTGTAGATAATACGGGATGTATTAAGGTTGCAGATTTTGGTGCATCAAAACAGGCTACCATTTCAGGTGCGAAGTCTATGAAGGGTACTCCATACTGGATGGCTCCAGAAGTAATTCTCCAGACTGGGCATAGCTTTTCTGCTGATATATGGAGTGTCGGATGTACTGTGATTGAGATGGCCACTGCAAAACCTCCTTGGAGCCAGCAGTATCAAGAGGTTGCTGCACTCTTTCATATAGGGACAACAAAGTCTCACCCACCTATTCCTGACCATCTCTCTTTTGAAGCGAAAGATTTTCTGCTGAAATGTCTGGAGAAGGAACCAAACTCAAGGCCAACTACATCCGATTTGCTAAAGCATCCTTTTCTCACTGGAGAACAGTCAGAATTCCAACCTATTTTCCACAATGCAGTCAGGGAGAATTCTGAAACCCTGTCACCCTCAGATGCCGCAACTCACAGAACTCTGCAACCATCAGCATGTCTTGCCTCTACAGATGTCTGTAACTTGGGTAGTCTGAGCAGCTCAAACATTTATAGTGAGAAGTTGGGAGGCAATAATATATGGGGAACAAACAACAGCGACGATGAAATGTGTCAAATTGACAACAAAGATGATTTTGTGTTGGATGACGTAAAGCTCAGTTCATCTGTTATGGCCGAAAATTTTAAGAGCTATAACCCAATGTGTGAGCCCTCTGATGATTGGGAGACAAAAATTGATAAAAGCTCAGAAGTGGAACAAAGAGGAATTAACTTGGACTCCAATCAAGAAGTCCACAAACCCAGTAGCCACTTGGGAGGTTTTGATGAGCAGGACAGAGAGTTTTCATTTCCTTCTGGAAGATCACTTTCTGAAGATGAGGATGAACTTACCGAGTCAAAAATTACTGCCTTCTTGGATGAAAAGGCTCTTGAATTGAAGAAACTGCAGACACCTCTATATGAAGAATTCTACAATAGTTTAAATGTAGGTTGCTCTCCAGGTTTTGTTGAAAGCACACGAGATGAGAATACTCCTAAGTACTTGAAACTGCCTCTTAAAGGCAGATCCCCAAATCGAGGACCAGGTAATCCACCTGTTATGGGTGATGCTTTTGGAAACAGAAGCCCCGGGAGTAATAGCAGATGCACATCAAATAGAAGCAATGCAGATAATTATAAAAGCTCGGATGACATTACATCACCTCCAATTAATGATAAAAAAGGGATTCTAACTGATGGTCCTCCAGAACCAACTAGTCCAAGTGTGTACTTCTCTGAGATACAGAAGAAGTGGAAAGAAGAGCTCGACCAAGAGCTTGAGAGAAAACGAGAGATGATACGTCAAGCGGGTGGGAAAACATCATCACCCAAGGATCGAGCTGCAAGCAGGCAAAGAGAATTAACGAGATTTGCATCTCCGGGAAAATAA 2010 43.63 MQELFGSVRRSLVFRSPVENEESQSPPFGAGALVDKIRKSRVFSRYSPPTLPPMPKDNAPKIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIASNGGSNEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDSLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTMQLLLGLEYLHKNGIMHRDIKGANILVDNTGCIKVADFGASKQATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATAKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSFEAKDFLLKCLEKEPNSRPTTSDLLKHPFLTGEQSEFQPIFHNAVRENSETLSPSDAATHRTLQPSACLASTDVCNLGSLSSSNIYSEKLGGNNIWGTNNSDDEMCQIDNKDDFVLDDVKLSSSVMAENFKSYNPMCEPSDDWETKIDKSSEVEQRGINLDSNQEVHKPSSHLGGFDEQDREFSFPSGRSLSEDEDELTESKITAFLDEKALELKKLQTPLYEEFYNSLNVGCSPGFVESTRDENTPKYLKLPLKGRSPNRGPGNPPVMGDAFGNRSPGSNSRCTSNRSNADNYKSSDDITSPPINDKKGILTDGPPEPTSPSVYFSEIQKKWKEELDQELERKREMIRQAGGKTSSPKDRAASRQRELTRFASPGK 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3706157 3711179 - Conep10aG0075400.1 Cone10ag0732 446530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0732 669 SUPERFAMILY Protein kinase-like (PK-like) 63 356 IPR011009 -
Cone10ag0732 669 MobiDBLite consensus disorder prediction 456 489 - -
Cone10ag0732 669 MobiDBLite consensus disorder prediction 637 669 - -
Cone10ag0732 669 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 42 326 IPR050538 -
Cone10ag0732 669 Pfam Protein kinase domain 65 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0732 669 MobiDBLite consensus disorder prediction 541 616 - -
Cone10ag0732 669 Coils Coil 622 646 - -
Cone10ag0732 669 MobiDBLite consensus disorder prediction 463 489 - -
Cone10ag0732 669 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0732 669 CDD STKc_MAPKKK 63 322 - -
Cone10ag0732 669 SMART serkin_6 64 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone10ag0732 669 FunFam Serine/threonine-protein kinase STE11 60 154 - -
Cone10ag0732 669 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524(InterPro)
Cone10ag0732 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone10ag0732 669 Coils Coil 104 124 - -
Cone10ag0732 669 Gene3D Transferase(Phosphotransferase) domain 1 62 356 - -
Cone10ag0732 669 MobiDBLite consensus disorder prediction 567 595 - -
Cone10ag0732 669 FunFam Mitogen-activated protein kinase kinase kinase 2 63 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0732 Cone-Chr10:3706157 Cone4ag0218 Cone-Chr4:999361 1.86E-241 dispersed
Cone10ag0732 Cone-Chr10:3706157 Cone3ag0774 Cone-Chr3:3980942 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81827 PF04065 Not3 1.10E-84 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0732 K20606 - csv:101209358 886.33