Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0798 ATGGGATTAATCCACATGTCCTCTGAGACAGAAAGGTTGATTTCTAGTGTGGAAACGCAGCCGGAGTTGTTGCCAGTGTCCAATTCTTTCCGGCGATGCGGCGGCGGAGACCCGCAGAAGATTTTCCAGGAGTTACCAAAAGCCAGTATTGTCTCAGTTTCCCGCCCAGATACTGGCGATATTAGCCCCATGCTCTTAACATACACAATTGATATTCAATACAAACAGTTCAAATGGCAATTGGTGAAGAAAGCATCCCAAGTTCTATATCTACATTTTGCATTGAAGAAACGCACAATTATTGAAGATCTTCATGAGAAACAAGAGCAGGTTAGAGAATGGCTTCAAAGCATCGGTATTGTAGAAAACACAGCTGTGGTTCAAGATGTCGACGAACCCGATGACGGAGCTTTCCCTTTACATAATGATGGTAGTGCTAGAAACAGAAATATTCCGTCTATTGCTGCATTTCCAATTATCCGGCCAGCTCTTGGAGGGCACCAATCTATCTCAGACCAGGCTAAATCAGCAATGCAAGGTTATTTGAATCATTTCCTCAGAAATATGGATATAGTTAATTCTCGGGAGGTTTGCAAATTTTTAGAGGTTTCCAAGATGTCATTTTTACGAGAATATGGTCCGAAATTGAAAGAAGGTTACTTAATGGTGAAGCATTTAAAGAAACTTGCAAGGGCCGATTCGGGTATAAAATGTTGTCCGTTAAATTGCTTTGACTGTATCGAGGACAAATGGGAGAAGGTGTGGGCTGTTTTAAAACCGGGTTTCTTGGCCTTGTTAGACGACCCTTTCGACACAAAACTCTTGGACATAATTGTTTTCGATCTACTTCCAACAACAAATATGAACAAAGGAGGGTCCGATGTATATTTAGCAAATCATGTCAAGGAGAGAAACCCTTTACAGTATTCATTTAAGGTTACAAGTGGGAATGGGACCATAAAGTTGAGAACAACAAGTAGTGGAAAGGTCAAAGATTGGGTTACTGCAGTTAATGATGCGAATTTGGGGCCCCAAGATGGTTGGTGTCATCCTCATCGGTTCCAATCGTTTGCTCCTCAAAGAGGATTAAATGATGATGAGAGCCAAGCTCAATGGTTTATCGACGGAAAAGCTGCCTTTGAAGCCATTGCTTCTTCTATCAATGATGCAAAATTCGAGATATTTATTACGGGATGGTGGCTTTGCCCGGAACTGTACTTGAGACGTCCTTTCCAGAATCATTCTTCCGAACGGCTTGATGCATTGCTAGAGAAGAAAGCAAAGGAAGGAGTTCAGATTCACGTACTTCTTTACAAGGAGGTTCATATTGCTTTGAAAATCAACAGTATGTATAGTAAGAAGAGGCTTTTAAACATTCATAAGAATGTCCGGGTACTCCGCTACCCAGACCATATGTCTACCGGGGTGTCACACCATGAAAAACTTGTAATTGTTGATTATCAGATTTGCTTTATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGACACAATGGAGCATAAAGTGGGTGATTTTCCGGCTCGTATTTGGCCTGGAAAAGACTATTATAACCCCAGAGAATCTGAACCAAATTCTTGGGAAGATACGATGAGAGATGAATTGGACCGGAAAAAATATCCGAGAATGCCTTGGCATGATGTTCATTGTGCTCTGTGGGGTCCACCTTGCCGTGATATTGCTAGGCATTTTGTTCAGCGTTGGAATCATGCTAAGAAAAACAAAGCACCGAACAAACACACTATACCTCTACTTATGCCACATCACCATAGAGTCCTCCCTCATTACATGGGAAGAAGCAAGGAGAGAGACATTCAAATCTCAGATCATGAACTAAAACAAAACGGTGTTAAAAAACTGGATTCTTCAGACTCCTTTTTGTCCCATTCACCCATGCAAGATATTCCGTTACTTCTTCCTCAAGAAGCTGATGGATCACCAGATTCTGATGCACGAAAAAAGTCAAATGGCTTGACCATGAATGGTAATAATGATAATTTTCTCTATCAGCCTGTAGAAAAATCCTTAGCTCCTAAGGAACAGAGGAATGGTGTGGTTGAAGATTTTGATATGATGGATCTCGAAAGTGAATCAGTACCAGAAGACGTGGCAGATGAATCTGGTAGTCCAATTGCTGACGAGAAGGATGACATAGGGCACGTGGGTCCCCGTACTTCATGTCGTTGTCAGGTGGTTAGAAGTATCAGCCAATGGTCAGCTGGAATGGGTAATCCAGAAGGAAGCATTCACAGTGCTTACTGTTCTCTCATTGAGAAGGCCGAGCATTTTATTTACATTGAGAATCAATTTTTCATATCGGGTCTTTCCGGGGATGAATCAGTTCTGAACCGTGTCTTAGAATCACTATACAGACGAATCTTACGCGCATACAAAGAACAACAATGTTTTAGAGTCATTATTGTCTTACCGCTCTTACCTGGATTCCAGGGTGGAGTGGACGATTTCGGTGCAGCAACTGTTAGAGCCTTAATGCATTGGCAATACCGAACAATTAGCCGGCCCAATACTTCATTACTATACAATCTTAATACTTTACTCGGCCCGAAAACAGAAGATTACATTTCATTCTACGGCTTGAGATCTTATGGTCGACTTTTTGAAAACGGTCCCATAGCTACTAGTCAGGTATATGTGCATAGTAAAGTGATGATTATTGATGATCGGATTGCTATGATTGGATCCTCAAATATTAATGATAGGAGTTTGCTTGGATATAGGGACTCCGAGATTGGGGTGATTTTTGAAGATAAAGAGTTTGATGACTCGTCAATGAATGGAGAACCTTGGAGGGCCGGGAAATTCACTTATAGTCTTCGGTGCTCGTTGTGGTCTGAGCATCTTGGTCTCAAAGCAGAAGAGATTGGTCGAATTAGTGATCCGGTAGTCGAAACAACGTACAAAGATCTATGGTTAGCAACTGCTAAGGAAAATACCCAGATCTATCAAGACGTCTTTGCTTGCATCCCAAATGACAGTATAAACTCAAGAGCTACATTAAGACAAAGCAGGAGCTATTGGAAGGAGAAACTGGGGCACACAACCATTGATTTAGGGATAGCATGCGAGAAGGTCGAAGAAGTAGACGACAATGGTGCAGTAATGGTCAAGGAAATAGATACAATGGAGAGATTGAAGAAGACAGTGAGGGGACACCTTGTTTGTTTCCCACTAAATTTCATGCTTCTTGAAGATGATTTGAGGCCAGCCTTCAATGAGACTGAATTCTATGCTGCTCAAGAAGTTTTTCGTTAA 3291 41.6 MGLIHMSSETERLISSVETQPELLPVSNSFRRCGGGDPQKIFQELPKASIVSVSRPDTGDISPMLLTYTIDIQYKQFKWQLVKKASQVLYLHFALKKRTIIEDLHEKQEQVREWLQSIGIVENTAVVQDVDEPDDGAFPLHNDGSARNRNIPSIAAFPIIRPALGGHQSISDQAKSAMQGYLNHFLRNMDIVNSREVCKFLEVSKMSFLREYGPKLKEGYLMVKHLKKLARADSGIKCCPLNCFDCIEDKWEKVWAVLKPGFLALLDDPFDTKLLDIIVFDLLPTTNMNKGGSDVYLANHVKERNPLQYSFKVTSGNGTIKLRTTSSGKVKDWVTAVNDANLGPQDGWCHPHRFQSFAPQRGLNDDESQAQWFIDGKAAFEAIASSINDAKFEIFITGWWLCPELYLRRPFQNHSSERLDALLEKKAKEGVQIHVLLYKEVHIALKINSMYSKKRLLNIHKNVRVLRYPDHMSTGVSHHEKLVIVDYQICFIGGLDLCFGRYDTMEHKVGDFPARIWPGKDYYNPRESEPNSWEDTMRDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKKNKAPNKHTIPLLMPHHHRVLPHYMGRSKERDIQISDHELKQNGVKKLDSSDSFLSHSPMQDIPLLLPQEADGSPDSDARKKSNGLTMNGNNDNFLYQPVEKSLAPKEQRNGVVEDFDMMDLESESVPEDVADESGSPIADEKDDIGHVGPRTSCRCQVVRSISQWSAGMGNPEGSIHSAYCSLIEKAEHFIYIENQFFISGLSGDESVLNRVLESLYRRILRAYKEQQCFRVIIVLPLLPGFQGGVDDFGAATVRALMHWQYRTISRPNTSLLYNLNTLLGPKTEDYISFYGLRSYGRLFENGPIATSQVYVHSKVMIIDDRIAMIGSSNINDRSLLGYRDSEIGVIFEDKEFDDSSMNGEPWRAGKFTYSLRCSLWSEHLGLKAEEIGRISDPVVETTYKDLWLATAKENTQIYQDVFACIPNDSINSRATLRQSRSYWKEKLGHTTIDLGIACEKVEEVDDNGAVMVKEIDTMERLKKTVRGHLVCFPLNFMLLEDDLRPAFNETEFYAAQEVFR 1096
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4048817 4054912 + Conep10aG0082200.1 Cone10ag0798 446596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0798 1096 CDD PH_PLD 192 340 - -
Cone10ag0798 1096 PIRSF PLD_euk 48 1096 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cone10ag0798 1096 PANTHER PHOSPHOLIPASE D 192 1073 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cone10ag0798 1096 Pfam PLD-like domain 889 932 IPR025202 -
Cone10ag0798 1096 Gene3D Endonuclease Chain A 724 942 - -
Cone10ag0798 1096 FunFam Phospholipase 721 941 - -
Cone10ag0798 1096 MobiDBLite consensus disorder prediction 644 673 - -
Cone10ag0798 1096 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 474 501 IPR001736 GO:0003824(InterPro)
Cone10ag0798 1096 SMART PH_update 215 344 IPR001849 -
Cone10ag0798 1096 SUPERFAMILY PH domain-like 211 340 - -
Cone10ag0798 1096 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 887 914 IPR001736 GO:0003824(InterPro)
Cone10ag0798 1096 Pfam Phospholipase D Active site motif 477 501 IPR001736 GO:0003824(InterPro)
Cone10ag0798 1096 SUPERFAMILY Phospholipase D/nuclease 728 930 - -
Cone10ag0798 1096 Gene3D - 214 343 IPR011993 -
Cone10ag0798 1096 CDD PLDc_vPLD1_2_yPLD_like_1 370 511 - -
Cone10ag0798 1096 SUPERFAMILY Phospholipase D/nuclease 331 597 - -
Cone10ag0798 1096 CDD PLDc_vPLD1_2_yPLD_like_2 747 931 - -
Cone10ag0798 1096 Gene3D Endonuclease Chain A 362 597 - -
Cone10ag0798 1096 SMART pld_4 887 914 IPR001736 GO:0003824(InterPro)
Cone10ag0798 1096 SMART pld_4 474 501 IPR001736 GO:0003824(InterPro)
Cone10ag0798 1096 MobiDBLite consensus disorder prediction 658 673 - -
Cone10ag0798 1096 ProSiteProfiles PH domain profile. 214 342 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0798 Cone-Chr10:4048817 Cone9ag1632 Cone-Chr9:11614724 3.28E-38 dispersed
Cone10ag0798 Cone-Chr10:4048817 Cone14ag0747 Cone-Chr14:4169913 0 wgd
Cone10ag0798 Cone-Chr10:4048817 Cone3ag0820 Cone-Chr3:4208748 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0798 K01115 - mdm:103433898 1516.13