Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone10ag0799 ATGGGTCACTTTTCGACCATGTTCAATGGATTGGCAAGGTCACTTTCGATGAAAAAGGGGAAAAATTCCGAGAAGGTGAGAAATCTCGATGGAAGAGAAGCTGCAGAAGAGATGGTCAAGGCTGCAAAGAAGAAGGACTTAATATTAAGAAATTCCGGCGTTGTAAAAGTAGATGGTTCAAACAATTTGGCCTCAGTTTTTTCGAGAAGAGGTGAAAAGGGAGTGAACCAAGATTGCTGCATTGTCTGGGAGAAATTTGGGGGTCAAGAGGATATGATGTTCTGCGGGATTTTTGACGGGCATGGGCCGTGGGGACATTTTATTGCGAAAACAGTTAGAGAATCAATGCTGCCATCTCTGTTACGCAATTGGCAAGAAGAACTTGCTCAAACCTCACTTGATTTGGATTTGAACTTAGGAAAGAAGAGCCAAAGGTTCAATATATGGAAGCATTCCTACATAAGAACTTGTTCTGCTATTGATCAAGAACTCGAGCAGCATCGCAAGATCAATTCGTTTTATAGTGGCACAACCGCCCTTTCTATAGTCCGACAGGGTGAAATGATAATAATAGCTAATGTTGGTGACTCTCGGGCTGTTTTGGCTACGACTTCAGATGATGGAAGTGTCGTCCCGGTTCAACTAACTATGGATTTCAAGCCCAACTTACCTCAAGAAGCTGAGAGAATAATTCAGTGCAATGGTAGGGTGTTCTGCTTAGAAGACGAGCCGGGGGTTCACCGAGTATGGTTACCGGATGAGGAATCACCCGGACTGGCCATGTCTAGAGCATTTGGAGACCATTGTGTCAAAGACTTTGGACTCATTTGCTTACCTGAAGTTACACACAGAAGCATCACTAGCCGAGACCTATTTGTTGTCCTTGCAACTGATGGGGTATGGGATGTTGTATCCAATGAAGAAGCAGTATGCATAGTGGGCTCCACGGAAGACCGAGCCAAAGCGGCGAAGCGTCTGGTCGAGTGTGCGGCTCGTGGATGGAAAAGAAAGAGGAGGGGGATTGCTATGGATGATATCTCTGCTATTTGTCTCTTCTTCGACTCTTCTTCTTCCCCTCAAATTCACTCATCTTCAACGGCTAATTAG 1107 44.9 MGHFSTMFNGLARSLSMKKGKNSEKVRNLDGREAAEEMVKAAKKKDLILRNSGVVKVDGSNNLASVFSRRGEKGVNQDCCIVWEKFGGQEDMMFCGIFDGHGPWGHFIAKTVRESMLPSLLRNWQEELAQTSLDLDLNLGKKSQRFNIWKHSYIRTCSAIDQELEQHRKINSFYSGTTALSIVRQGEMIIIANVGDSRAVLATTSDDGSVVPVQLTMDFKPNLPQEAERIIQCNGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDHCVKDFGLICLPEVTHRSITSRDLFVVLATDGVWDVVSNEEAVCIVGSTEDRAKAAKRLVECAARGWKRKRRGIAMDDISAICLFFDSSSSPQIHSSSTAN 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4059328 4062430 + Conep10aG0082300.1 Cone10ag0799 446597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone10ag0799 368 PANTHER PROTEIN PHOSPHATASE 40 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone10ag0799 368 CDD PP2Cc 64 353 IPR001932 -
Cone10ag0799 368 FunFam Probable protein phosphatase 2C 34 54 355 - -
Cone10ag0799 368 SMART PP2C_4 54 351 IPR001932 -
Cone10ag0799 368 SUPERFAMILY PP2C-like 63 354 IPR036457 -
Cone10ag0799 368 Pfam Protein phosphatase 2C 84 330 IPR001932 -
Cone10ag0799 368 Gene3D - 52 355 IPR036457 -
Cone10ag0799 368 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0799 Cone-Chr10:4059328 Cone1ag1702 Cone-Chr1:57974327 3.73E-108 dispersed
Cone10ag0799 Cone-Chr10:4059328 Cone14ag0746 Cone-Chr14:4163280 9.26E-138 wgd
Cone10ag0799 Cone-Chr10:4059328 Cone3ag0822 Cone-Chr3:4221977 1.12E-244 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone10ag0799 - - - 0.0